Pseudomonas aeruginosa FRD1, UC33_RS01035

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain FRD1 contig_02_scaffold01, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGTTCTGGGTCAACCTGCTGGAGGTGCCGGGGCGGGAGGACGGCAGCGGCAACCTGCTGCTGGTGAGCTACCGCCTGCGGATGAAGCTCCTGTTCCGTCC GCAGGGTCTGGCCGGCGATCCGCGAGCCGCCGCGCGCCAGGTCGTCTGGCGTCTGCGTCCGGCGGTACGGCCGGGGCAGCGGGCGCTGCTGGAGGCGGAC AACCGCAGTCCCTATCACGTTTCCCTGGTGCGCCTGGAGCTGGGCGAGGGCGACCTCGCCATGTCCCTCGGCAGCGTCACCCTGCCGCCTTTCGCCCTTA CCCCGTTGAGTCTGCCGGCCGTGCCCGGCGAGGCGGCGCGGGTCCATTTCGATGCGGTGGGGGATGACGGCCAGATCGAGCGCGGCGACGCGCCGGCAGA GAGATACCCGTAGGAGTTCGGCAGGGCCCGGGGAGTTGGGCTCCTGCCGTAGCACGGCCCTGCGAATAGGTCGCGGGGTTTCACTGGAGGAAGGAAGCAC
DNA Sequence for Gene
>UC33_RS01035
ATGAACAAATGCTATGCACTGGTCTGGAACGTATCCCAGGGCTGCTGGAACGTCGTCAGCGAAGGCAGTCGCAGGCGCGGCAAGCCCGCCGGCGCCAAGG CGGCGATCGCCTCCGTCCTGGCCCTGCTGGGCGCCACGGCCCTGGCTCCGGCCTATGCGCTGCCAAGCGGGGGAACGGTGGTCGGCGGGAGCGCGAACGG GGAGATACACCTGTCGGGCGGCAACAGCCTGTCGGTCAACCAGAAGGTCGACAAGCTGATCGCCAACTGGGACTCCTTCAGCGTTGCCGCCGGCGAGCGG GTGATCTTCAACCAGCCGAGCAGTAGCTCGATTGCCCTGAATCGGGTGATCGGCACCAAGGCCAGCGATATCCAGGGCCGGATCGATGCCAACGGCCAGG TCTTCCTGGTCAACCCCAACGGCGTGCTCTTCGGTCGCGGCGCCCAGGTCGATGTCGGCGGCCTGGTGGCTTCCACGCTGGACATCACGGATGCCGAGTT CAACGGCAACTCCTCCAGATACCGTTTCACGGGTCCCTCTACCAACGGTGTCCTCAACCAGGGAGGCGCCATCACCGCGGCGGAAGGCGGCAGCATCGCC CTGCTGGGCGCGCAGGTCGACAACCGCGGGACGGTCCTGGCGCAGATGGGCGGTGTCGGGCTCGGCGCGGGCAGCGACCTGACGCTGAATTTCGACGGCA ACAAGCTGCTCGACATCCGCGTCGACGCCGGGGTCGCCAATGCGCTGGCAAGCAACGGCGGCCTGCTCAAGGCCGACGGGGGGCGAGTCCTGATGGCGGC CAGGACCGCCAATGCGCTGCTCAACACGGTGGTGAACTCCCAGGGTGCCATCGAGGCCCGTTCGCTGCGCGGCAAGAACGGGCGGATCGTGCTCGATGGC GGCCCGGACGGCAAGGTCATGGTAGGAGGCGCCTTGTCCGCCAATGCGCTGAACGGACCGGGGCACGGCGGCACGGTCGAGGTCCGGGGGCAGGCGGTGG AGGTGGCCCTGGGCACCCAGGTGAACACGCTCGCCAGCAATGGCCTCAACGGCACCTGGAAGATTGCCGCCGACAAGATCGACGTGCGCCCATCGGCGGT GTCGGATGGCGTCACCGTTCATGCCGACACCCTGTCGCGGAACCTGGCGAGCACCAATATCGAACTGGTTTCGACCAAGGGCGACCTGGACCTCGACGGC TCGGTGAGCTGGGCATCGGGCAACCGGCTGGGGCTGGGCTCCGCGGCCGACCTGACGCTGAATGGCAGGCTGAATGCCAGTGGCGCCAAGGCTGGGCTGG AGCTGAAGGCCGAAGGCGCTATCGATATCAATGACAAGATCGTTCTCGGCGGGGCTGGCAGCGCGCTGGCCATGGATGCCGGCGAAGGCCACCGGGTGAA CGGCACGGCGTCGGTCTCCCTGGCCGGGGCCAACGCGACCTACGTCTCCGGCGGCTATTACTACACGGTGGTGCAGAACCTGGCGCAGTTGCAGGCGATC AACAAGAACCTGGACGGCCTGTACGTGCTCGGCGGCAATATCCTGGGCGGCAGCTATTACTGCACGGCACTGCAGTCCATCGGCGGGCCCGCCGGCGTCT TCAGCGGCACCCTGGACGGTCTCGGCAACAGCATCGGCAATCTCTCGATCAGCAACACCGGGCCGAATGTCGGGCTGTTCGCCCGCTCCTCGGGCACCCT GAGCAACCTGAAACTGAACAACCTGCGGGTATCCGATAACACCTACGGCTCCGGTCCGTCTTCGCTCGGCGCCCTGGTCGGGATCAACAGCGGGCGTATC GCCAACGTCAGCGCCAGCGGGGTCTCGGTCGTCGGCAGCCGACTGCGCTCCAACGCACTGGGCGGCCTGGTCGGGCGCAATATCAACGGGCAGATCACGA ACGCATCCGTCAGCGGCGGCGTCACCGCTTATGCGGCGAGCACGGCGGTCGGCGGTCTGGTGGGGGAGAACTTCACCACCGCCTGGGGGCCGGAGGCGGT CATCGAGAACGCCCACAGCAACGTCCATGTGGCTGCACAGTCCACCGAGCGCAACAGCCTGGGCGGCGTCGGCGGCCTGGTCGGACTGAATGCGAAGGCC ACGATCAGGGCGTCCGGCAGCCAGGGGAAGGTCGAGACCTACCGGCCCGGCCTGAACGTCGGCGGCCTGGTCGGCTACAACATGTTCGGCCACGTCTCCG ATAGTAGCGCCAGCGGCCAGGTGGAGGCCGGCGGCGCGGGGTATACCGGCGGGCTGGTCGGCCTGAGTTCCGGCGGCGAGATATTCCGCTCGCAGGCGAG CGGGTCGGTGTACAGCAAGGGCGGCCTGGCGACCGGAGGGTTGATCGGCAAGGCAGAAGGCAACGGCATGCTCGGAAACCTGAAAGCCAGCGGCAGCGTC ATGGACCAGGGGGGCGCGGATCTGGGCGGGCTGGTCGGCAACAACAGCCAGGGTGCCATCGAGACCGCCGAGGCGACGGGCAAGGTCAGCGGCGGCAGCA ACAGTCGCGTCGGCGGGCTGATTGGACGAAACCTCGGCGGTTCCGTCGCCCATGCGATCTCGCGCGGCGACGTGAGCGGCGGCTTCAACAGCCTGGTGGG CGGGCTCGTCGGCCACAACGGCGGCGAACTGTTCAACGTGGATGCCAGCGGCAGGGTCAGCGCCGCTGCGAGTGCGTCGGTTGGCGGCCTGGTCGGCAGC AACGCCGGTTCGATCCTGTCGGCGCGCAGCAGCAGTACCGTCAGCGGCGGCGGGCGCAGCCGCATCGGCGGCCTGGTCGGCGAGAACCAGATCCAGGGAC GCATCGTTTCGTCCATGTCGGAAGGCACCGTCAGTGGCGACTACTACGTCTCCATGGGCGGGCTGGCCGGCGTCAACCTGGGATCGATCAAGTACTCCGG CGTCAGCGGCAAGATCGACTTCAAGCCTCAGTCCCATTACGGCCAGATCTACGGTGCGCAGGTCGGCGAGAACCGTGGGGTCCTGGGCGGCAACTACGTG ATCGGCGAGGCGGCGCTCCTGCCGCCTGCCGGTATCGACTACGGCAACATCTGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCCGGCAGGGGAGGTCCCAGGCGGACCTCCCCTGCCGGCCGGGGCCGCTTTCGCCTGGAGTGCGGCCCTCTTCCGCAGGCGCAATCTTGGAGAGTTCCA TGAGCATGAGGTTATTTCCTGGCCGCGTTTCCCTGCGCCGCCGGCCTGGCGCGCAGGCTCGGCAGGCGCTCGTTCTCGGTCTCTGCTGCCTGACCGGCGG CCAGGCCTGGGCCCTGAACGACATCGCCCTGAACTGCTCGTTCGGCAATGGCCAGGGCATGCCCTGGCGTGTGGTGAACGAGCTGACCAGCGGCACGGCG AAAGGCACGGTGCTGTTCGTCAGGCCGGTGAGCCTGTTCCTGAGCTACAAGCCCCAGGCTTCCCAGGAGGCGCATGAGCTGGTCCTCGGGGGGAACTGGT CCGGGGTGGGCTATCCGGGGCCCTACGGCACGGTGGCGTCCGACGTCAAAGGCATCGGCTATCGGATCTCGGTGGATGCCCAGGACGGCGTCAAGCGGGT
Amino Acid Sequence
>adhesin
MNKCYALVWNVSQGCWNVVSEGSRRRGKPAGAKAAIASVLALLGATALAPAYALPSGGTVVGGSANGEIHLSGGNSLSVNQKVDKLIANWDSFSVAAGER VIFNQPSSSSIALNRVIGTKASDIQGRIDANGQVFLVNPNGVLFGRGAQVDVGGLVASTLDITDAEFNGNSSRYRFTGPSTNGVLNQGGAITAAEGGSIA LLGAQVDNRGTVLAQMGGVGLGAGSDLTLNFDGNKLLDIRVDAGVANALASNGGLLKADGGRVLMAARTANALLNTVVNSQGAIEARSLRGKNGRIVLDG GPDGKVMVGGALSANALNGPGHGGTVEVRGQAVEVALGTQVNTLASNGLNGTWKIAADKIDVRPSAVSDGVTVHADTLSRNLASTNIELVSTKGDLDLDG SVSWASGNRLGLGSAADLTLNGRLNASGAKAGLELKAEGAIDINDKIVLGGAGSALAMDAGEGHRVNGTASVSLAGANATYVSGGYYYTVVQNLAQLQAI NKNLDGLYVLGGNILGGSYYCTALQSIGGPAGVFSGTLDGLGNSIGNLSISNTGPNVGLFARSSGTLSNLKLNNLRVSDNTYGSGPSSLGALVGINSGRI ANVSASGVSVVGSRLRSNALGGLVGRNINGQITNASVSGGVTAYAASTAVGGLVGENFTTAWGPEAVIENAHSNVHVAAQSTERNSLGGVGGLVGLNAKA TIRASGSQGKVETYRPGLNVGGLVGYNMFGHVSDSSASGQVEAGGAGYTGGLVGLSSGGEIFRSQASGSVYSKGGLATGGLIGKAEGNGMLGNLKASGSV MDQGGADLGGLVGNNSQGAIETAEATGKVSGGSNSRVGGLIGRNLGGSVAHAISRGDVSGGFNSLVGGLVGHNGGELFNVDASGRVSAAASASVGGLVGS NAGSILSARSSSTVSGGGRSRIGGLVGENQIQGRIVSSMSEGTVSGDYYVSMGGLAGVNLGSIKYSGVSGKIDFKPQSHYGQIYGAQVGENRGVLGGNYV IGEAALLPPAGIDYGNIW
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site