Pseudomonas aeruginosa MRSN 20176, TN45_RS22555
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain MRSN 20176 scaffold00007, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGAGATCGCCGGGGGCCAGCTCGGCGAGCTTGTGGCAGAGTTCGATGGCGCGCGGGTTGGCCATGTCGCAGAAGGGATTGGAATAGGCCAGCAGGCGG GTCTGCTCGGCCACGGTGCGAGCCATTTCCTCGCGCCCCAGGCCGATGTTGGTGCACCACATGCCGCCCACCGCGTCGAGGTAGCGGTTGCCGGCGGTGT CGTAGATATAGGCGCCGTCGCCGGCGGCGATGTTCAGCGAGCCGTTGACGCGGTGGTCGTCGAACACGTGGTAGCCGTGCATGTAGTGGGCCTGGTCGGC ACGGACCAGGTCGGCGTCGCCGAGGGGGGACGTGGCGTGCAGTCTTGCGTTCATCGGGCTGTCGCTCTTCTCGGATGGATGCTCCGAGGGTGCAAGAGCA CCGCGCGGCGGGCCATACCCCATTTTGGGGTAAGCGCTGGGTGCGGCCGACGCGGCTTGCTATCCTGCGGCGACAACGACAAGAACGAGCCGTACCGTCC
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| DNA Sequence for Gene |
>TN45_RS22555
ATGCAGGCCATCGCCCCGAACGCCCTCGACCGCTGGCACGAACACCTGGCGCTGGCGATCCGGCGCCTGCGCCAACCCGACTTCCTCGCCGCGCTGGTCG ACGCCATCCACCAGTTGGTGCCGATCGAGTCGAGTATGATCAGCCTGGAACGCAAGGGCCACGCGCCCACCCTGCTCTACGAGCGCGGCATCGCCGAGCG CTTCCGCGAGGCGATCATCCGCCGCTACTTCTCCCGCGGCTACCTGCTCGACCCTTTCTGCCTGGCGGTGGAGGAAGGCCTTCCGGAAGGCTTCTACACC CTCGGCGAGATCGCCCCCGACGACTTCTTCCAGAGCGCCTACTACCAGACCTACTACCTCGGCGCCGGAGCGGTGGAGGACGTCTACTACATCCTCGACC TCGGCCCCACCGAGAAGCTCTCGATCTGTCTCTACAACGGCCTTTCGGCGAGCCGCTACAGCGACGCCCAGGTCGCCGCCCTCGCCGGCCTGGCGCCGCC GGTGCTGGAGCTGGCCCGGCAGTTCTGCGCCGGCCGCGCCGACCTCTCGCCGAACCCGCAGGCCGACCTCGCCCCGCGCCTTCAGGAAGTGCTGCGCGGC TTCGGTCGCGGCGTGCTCACCGACCGCGAACGCGAGGCCTGCCACCTGCTGCTCAGCGGCCACTCGGCGAAATCCAGCGCGCGGCTGATGGACATCTCCC CGGAGACCGTGCGCATGCACCGGAAGAATCTCTACACCAAGCTGGAAGTCGGCTCGCAGTCGGAACTGTTCGCGCTGTTCATCGAGTGCCTGAGCCAGGG GCAGCGCGTCGGCCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACTCAGGGCGAGACGCCGCCGAGCAACTGTTCGGCCAGCGCCGAGCCCTCGCGCAGGCGACGGTCGTTGCCGATGCGGCGGGTCAGGCCGATGCGGTCG AAGTGCTCGAGGATCTGGATGCTGCGCTTGCGGCCGATGCCCAGGCGGTCGCGGAATTCCGCCGGGCGGATCAGCCCGGCGGGGTCGCGCACCTGCACAG CGATCTCGGCCAATTGACGCAGGGTGGCTTCCGGGTAGAACAGGTCGCGCACCACCTGCTGCAACTGGCCCAGGCGCGCCAGCTTGCGCAGCAGGTTGCG CATGGCGGCTTCGTCCTGGCGCAGCTCGCGGGCCAGGTCGCGAACCCAGGGCGGGTCGTAGCGGCCGGCTTCGAGCAGCGGCCAGAGGCGCGCGCGCAGT TGCTCCTCGCTATCGCTCAGGCGCACTTCGTGGCCGGGCAGGTGCAACCAAGGCCCGCTGCTGTGCACATCGCCGCCGGCCAGGGCGGCGTCGAGCAGGG
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| Amino Acid Sequence |
>LuxR family transcriptional regulator
MQAIAPNALDRWHEHLALAIRRLRQPDFLAALVDAIHQLVPIESSMISLERKGHAPTLLYERGIAERFREAIIRRYFSRGYLLDPFCLAVEEGLPEGFYT LGEIAPDDFFQSAYYQTYYLGAGAVEDVYYILDLGPTEKLSICLYNGLSASRYSDAQVAALAGLAPPVLELARQFCAGRADLSPNPQADLAPRLQEVLRG FGRGVLTDREREACHLLLSGHSAKSSARLMDISPETVRMHRKNLYTKLEVGSQSELFALFIECLSQGQRVGP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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