Pseudomonas aeruginosa MRSN 20176, TN45_RS15640
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain MRSN 20176 scaffold00004, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCCTGGTCGACGAGACCCTGGTCTTCAGCGCCTGGCCGGGACAGGGCGCCTGGCAGGAAAAACCGCTGGAGTCGCATCTCTACGGCAGTCGCCAGGCGG GCGAATACCTGCCGCTGGCGATCAAGCGCCTGCTCGACGAACGCGCCCCGGCCAGTCGCGACCTGGCCAACGTCTACCTGCAATGCCTGATCCTCGGCTT CCGCGGTCGCCTGCGCGGGCCGCGCGGCGAGGCGCTGCACGAGAAGTGGCGGCAGGCGCTGTTCGCCTTCGCCTGGCAGCGCGAGGCGGACGCCGCCGAC CTCGGCCGCCGCCTGGAACAGCCCGCCGCCGCGCCGCCACGGCGCCTGCCGGTGCGCGCGGCGCTGCCGGACGGTTTCCGCCTGGGCCTGGCGGTGCTCG GCCTGGTGCTGCTGATGAGCGGCATCGGGCACCTGTTCTGGCGCGACATCCAGCATGAAATGGCGGCGGTGACCCACCTGGCCGATGCGGAGCAGGCGCC
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| DNA Sequence for Gene |
>TN45_RS15640
ATGAGCGGCGCGACGCTGTTCATGCTGGTTCTCCTCCTGGTGCTGCTGGCGCTGCTGCTGGGGGCGCTGGGCTGGTGGTGGCGGACCCGGGGCGGTACGG AGATCCGCAGCTTCTACGCGGCGGTCCGGCAGATGGAGCGCGAGCAGGGCTGGCAGGGCCGCTACGAAGCGCCGTGGCTGCTGATGCTAGGCAACGAGAC CGAGGGCGAGCAGTTGTGCGCCACCTGGCGCCTGCTGCCGGTGGCGCGTCCGGCCTGGTTCGGCCGCTGGTGGTCGGACGGCGAGGGGGCGATCCTGCTG GTGCCCGAGTCGGTGTTCCTGCCCGACGAGGGCCTGCGCCGGCAAAGCGGCGCCTGGCTGCGCCTGTTGCGTCTGTTCCTGCGCCTGCGCGGCAGGCGCG CGCTGGACGGAGTGGTCTGGAACATTCCGCTGGCGCGGCTGCAGGATGGCGAGCAGGCGGCCAACCTCGGCCTCGCCGCCCGTCGTCGCTACGTGGAACT GACCCAGCGCCTTGGCCTGAGCCTGCCGGTTTACGTGGTGATCACTGGCCTGGAAGACCTGCCGGGTTTCCAGGAGCTTCTCGCGGCGCTGCCCGAGGAG GCGCGCGAGCGCGCCCTCGGCTGGTCCTCGCCGTTCGCCGCCGAGGCGGCCTGGCAGTCGCGCTGGTGCGAGCAGGCGCTGGAGGAAATCACCGCCACCC TGACCGAGTCGATCGTCGAACTCGGTACCTTGCGCGGCCAGGTGAACAACGACCTGTATTGCCTGCCGCCACGCCTGGAAAGCCTCCGCGGTTCGTTGCA GGCGCTGCTCGAACCGGTCTTCCAGGGCAACGCCAGGGGCGAGGCGCCGCGCTTTCGCGGTCTCTACCTGAGCGGCAGCGAGGCGGCGGGGGCGGCAAGC GACGAAGCCCTGCCGGCGGTCGACGCGCCGCGTCGGCGCAGCAGCTTCGCCAGCCAACTGTGGGCACGGCGGATCCTTGCCGAGGAAGGCCTGGCCCAGG CGGTGCCGCGCATCCTCCAGCTGCGCCAGCGCTGGCAACGCGGTATCGGCCTCGCTGCGCTGTGCCTGTGCCTGCTCTGGGGCGGCCTGATGACCTGGGT CTGGCGTGACGCGCTGCGCGACGCCGGCGAACTGTCGCAACTGCTGCATGGCGCCAGCGAGCGCTACCAGCCGCTCGACGACGACACCCGGCGCGCCGCC CAGGTCCGGCAGAACGTCCAGGCCTGGTGGCAACTGGTGGCACAGGCGCCGCGCTGGCGCTTCACCTCGCTGGCATTCCCCAGTTCCTGGTTTTCCTCCC TGGACGCACGCATCGACAGCGCGTATCGCCGCGTTTCCGAGCGCCTGCTGGTACGCCCGCTGCGCAGCCTGCTGGAAGGCGAGGCGAGCGACCTGCGGGC GATCCGCAGCGACGGCCAGCCCGGCCTGAAGGAGGGCGACGACCCCAGCCAGTGGAAGGACTACCTGGCGGCGAAGGACCTGGTCGCCCGCGCCACCACC CTGGAGCGCCACAATCGCCTGTTCGCCCAGGCCATCGACAACCGCAAGACGCCGCTCGACGATCTCCTGCAACTGAGCAACGACGCCCTGGGCAGCAACT ACAACGGCGGCAGCCTGGCGCGCCTGGCCTATTACAACCGCACGCTGTTCGCCGAGCGTCCGGCCGATCTCGCCGCCCTCGACCTGGGCCGGGTCGGCGC CACGGCGGCGGATAACTTCCATGACCTGATGGCCCGCTGGCTGAACGCCTACTTCCTCACCGACAGCCTGGAACGCACCGGCAATGCCCTGACCCAGGAA CTCACGCAGCTCGGCCAGGAACGAGATGCCACGGCGGCCCAGTTGCTGGGGGTCGGCGAATTGATCAACCACCTGCAGCAGCAGGTCAACCGCATCAACC TGATCTGGGGCAATGGCGTCGGCCAGGATCTCGTCCCTGGCTACCAGAACCTGCTCAAGAGCGCCCAGCAAAGCAGCCTGCTGGGAGACCGCGTGGAGGA ACTGCAGAACCTCACGGTGCAGTTGCAGCAGCAGTTCCGCAGCGAATGGATCGCGCCTCCGGAGGCTGCCGGCGACGGCCTGCTGGTGAAGCAGGGGGCG ACGCTCAAGCTGGCCGATGACCTGCTCGGCCTGAAACGCGCCATCGATGACCTGAAGACCAAGGACTTCGTCTCCGTGGCCCTGGCCGGCAAGACGCTGG CGGAGCACTCCCTGCTGAGCATCGACGACATCGGCGTGACCCAGGCGTTGAGCTTCTTCAACGACTTCAGCGGCTACTACGAGAGCACCCTGCCGTCGCT CAACCCGCGCTATCGCTACTCGGTCCTGCACGCCGCCGCCAGCGCGACGACCGAGGCCATGTGGCAGAGCCTCGGGCCGCGCAGTCGCAGCCTGACCAGC CGCAATGCCTCGCGCTTCGACGTGCAGGTCAAGCAGGTCCAGGCATTGCAGGCGGCGCTGCTGGAGTTGCAGGACATGCAGGCCGGCTCGCGCCTGCTGG CCAGCCTCAACGCGCTGGCCGTGGCCGATATCGGCCAGGCCCTGCGCGACATCGACGAGCAGGCGGTGCTGCGCGAGCCGGTCGATTTCAGCCGTTGGTC GGGCGCGCCGAATTTCGGCCTGCAGGCGTTCCGCGCCCAGGACAGCGCCGAGCTGAAGCAGAGCCTGACCAGCCAGTTCAATGCCATGGCCGCGGTCGCC GAGCGCCACGCCCCGGCGCTGGAGTGGCTGCAGGCGCAGCAGTCCAGCCTGGCCACCGCCGACTACAACGCGTTCGTGCGCTTCAGCGCGCTCAACGCCG AACTGCAGAAATTCAAGGCCGACAACCCGGCGAGCACTGCGGCGCAGCTGGCGAAGCTGGTGGGTAACGATTTCAACCAGATGGACATCGGCAGTTGCGC CGACATTCTCAACGGCGTGCTCCTGCCGTCCAGCCGCAGCGACCTGGCGACGCGCCTGGTGGACCTGCGCCAGGGCGCGCTCGGGCGCTGCCAGTCGTTG CAACAGCAGCAGGCGGCGCAGGCCTGGAAGGACCTCGCCGACTACTTCAACCAGTACCTCGCCGGACGCTTCCCCTTCGCCTACAGCCTGGAAGCGGCCG ATGCCGAGCCGGGGCGGGTGCGGCACCTGCTGAAGCTGATGGAGACGCGCTTGCCGCAGGTGCGCGAAGGGCTGGCCCAGGTTCGCTCGCCGGACCTGCC GGCCGCCGAGGACTTCGTCCGCCGCCTGGAACAGGCGCAGGGCTGGCTCGGCCCGCTGTTCGAGCGCGACAAGTCGGGCCTGCTCGGCGTCGCCCTGGAC ATCGACTGGCGCAGCGACCGCAGCCTGGAACGCGGCGCCGACCAGGTGATCGCCTGGAGCCTGTACTCGGGCGACCAGGAAAGCCGGTTCCCCGGCGCGC AGGACAAGGGCCTGACCTGGAACGTCGGCGATCCGCTGAAGATCATGCTGCGCTGGGCGAAGAACGGCTCGCAGCGTCCGGCAGACGACCCGCGCCAGGC CAGCCTGGCGGTGGCCGACCTCGAGGCCGGCTGGAGCTACCAGGGCTCCTGGGCGCTGCTACGCATGATGCGCGCGCACTTCTCCCGGCAGCGCCCGCCG AACGTCGACTACACGGAGTTTCCGCTGGTCCTGCAACTGCCGGTGTATGCGCCCTACAGCCCGGAAAACGAGGCTCGGATGTTCCTCCGCCTGTCGTTGA TGAGCCTGGGCGGCAAGACCCCGCTGTCCATCCAGCCGCTGCCGGTGCGCGCGCCGCAATCGCCGTTCGCGACGCTGTTGCCGGCCACCGTCGCCAGCAA CGGAGGTACCCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCCTGCCTCTTTCCGGCAACGCCCTGCCCCTGGAAGTGCTGCTCGAACCGATCGACCCCGGACAGCCGTGTGGCCCCAGCCTGCGCTACGACCCGGACTA CGACCGCCTGCGCGAGTTGCGCCGGGAGGACGACAGCAGCCTGCCGACCGGCGTCTGGCAGGCGGAAGCCAAGCGCGCCGACTGGGCCGCGGTGGAGCAG TTGGCCAGCGAACTGTTGCAGCGGCGCAGCAAGGACCTGATGCTCGCCGCCTGGCTCGGCGAGGCCTGGCTGCAACGCGGCGGGCTGGGCGGATTGCAGC GCGCGCTGGTGCTGCTGGCGGAACTCTGCGAGCGCTACCCCGAGGAGGTGCATCCGCAAGCCCAGGACGGCGATCAGTCGTGGCGGGTGCCGCCCATCGA CTGGCTGTTGCGCCGCTATGCCGAGCTGCTGCACACGCGCCTGCCGCTGATGGGGCAGGGCGCCTTCGCCGAGATCACCCTCTATGCCTGGCAGAGGTTG
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| Amino Acid Sequence |
>hypothetical protein
MSGATLFMLVLLLVLLALLLGALGWWWRTRGGTEIRSFYAAVRQMEREQGWQGRYEAPWLLMLGNETEGEQLCATWRLLPVARPAWFGRWWSDGEGAILL VPESVFLPDEGLRRQSGAWLRLLRLFLRLRGRRALDGVVWNIPLARLQDGEQAANLGLAARRRYVELTQRLGLSLPVYVVITGLEDLPGFQELLAALPEE ARERALGWSSPFAAEAAWQSRWCEQALEEITATLTESIVELGTLRGQVNNDLYCLPPRLESLRGSLQALLEPVFQGNARGEAPRFRGLYLSGSEAAGAAS DEALPAVDAPRRRSSFASQLWARRILAEEGLAQAVPRILQLRQRWQRGIGLAALCLCLLWGGLMTWVWRDALRDAGELSQLLHGASERYQPLDDDTRRAA QVRQNVQAWWQLVAQAPRWRFTSLAFPSSWFSSLDARIDSAYRRVSERLLVRPLRSLLEGEASDLRAIRSDGQPGLKEGDDPSQWKDYLAAKDLVARATT LERHNRLFAQAIDNRKTPLDDLLQLSNDALGSNYNGGSLARLAYYNRTLFAERPADLAALDLGRVGATAADNFHDLMARWLNAYFLTDSLERTGNALTQE LTQLGQERDATAAQLLGVGELINHLQQQVNRINLIWGNGVGQDLVPGYQNLLKSAQQSSLLGDRVEELQNLTVQLQQQFRSEWIAPPEAAGDGLLVKQGA TLKLADDLLGLKRAIDDLKTKDFVSVALAGKTLAEHSLLSIDDIGVTQALSFFNDFSGYYESTLPSLNPRYRYSVLHAAASATTEAMWQSLGPRSRSLTS RNASRFDVQVKQVQALQAALLELQDMQAGSRLLASLNALAVADIGQALRDIDEQAVLREPVDFSRWSGAPNFGLQAFRAQDSAELKQSLTSQFNAMAAVA ERHAPALEWLQAQQSSLATADYNAFVRFSALNAELQKFKADNPASTAAQLAKLVGNDFNQMDIGSCADILNGVLLPSSRSDLATRLVDLRQGALGRCQSL QQQQAAQAWKDLADYFNQYLAGRFPFAYSLEAADAEPGRVRHLLKLMETRLPQVREGLAQVRSPDLPAAEDFVRRLEQAQGWLGPLFERDKSGLLGVALD IDWRSDRSLERGADQVIAWSLYSGDQESRFPGAQDKGLTWNVGDPLKIMLRWAKNGSQRPADDPRQASLAVADLEAGWSYQGSWALLRMMRAHFSRQRPP NVDYTEFPLVLQLPVYAPYSPENEARMFLRLSLMSLGGKTPLSIQPLPVRAPQSPFATLLPATVASNGGTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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