Pseudomonas aeruginosa MRSN 20176, TN45_RS14025
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain MRSN 20176 scaffold00003, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGATACCGCCTTCGCGCACCGCGCGGGTCAGCGGGCCGTCCTGCCACCAGGTGCCGTCGGCGCCGATCAGATGGCGGCCGAGCAGGTCGGCGGCGCCC AGGTCGTCGTGGCAGGCGACGCTGTACAGCGGCAGTTCCAGGCGCCGCGCCATGTACTGGACGAAGCGGGTCTTGCCGCAACCGGTGGGGCCCTTGAGCA ATACCGGCAGGCCGTGCCGCCAGGCGCGCTCGAAGACTTCGATCTCATGGCCGGTGGCCTCGTAGAAGGGTGTCGCGTCCCGCATGTCCTACTCCTGCGC TAGGGATTAGGACCGCACGCTATTCACAGTTGGAAGGTGCCACAAGCGCAAAGCAACGCAATCTTGATTCCGGTCAAGCAAGGGTAAAGACCCTGCTTTC TATGATCCTTTCGCGCCATGAATTCCCGGGAGTTCCCGACGCAGCCACCCCCAAAACACTGCTAAGGGAGCGCCTCGCAGGGCTCCTGAGGAGATAGACC
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| DNA Sequence for Gene |
>TN45_RS14025
ATGCCATTTGGCAAGCCACTGGTGGGCACCTTGCTCGCCTCGCTGACGCTGCTGGGCCTGGCCACCGCTCACGCCAAGGACGACATGAAAGCCGCCGAGC AATACCAGGGTGCCGCTTCCGCCGTCGATCCCGCTCACGTGGTGCGCACCAACGGTGCCCCCGACATGAGTGAAAGCGAGTTCAACGAGGCCAAGCAGAT CTACTTCCAACGCTGCGCCGGTTGCCACGGCGTCCTGCGCAAGGGCGCCACCGGCAAGCCGCTGACCCCGGACATCACCCAGCAACGCGGCCAGCAATAC CTGGAAGCGCTGATCACCTACGGCACCCCGCTGGGCATGCCGAACTGGGGCAGCTCCGGCGAGCTGAGCAAGGACCAGATCACCCTGATGGCCAAGTACA TCCAGCACACCCCGCCGCAACCGCCGGAGTGGGGCATGCCGGAGATGCGCGAATCGTGGAAGGTGCTGGTGAAGCCGGAGGACCGGCCGAAGAAACAGCT CAACGACCTCGACCTGCCCAACCTGTTCTCGGTGACCCTGCGCGACGCCGGGCAGATCGCCCTGGTCGACGGCGACAGCAAGAAGATCGTCAAGGTCATC GATACCGGCTATGCCGTGCATATCTCGCGGATGTCCGCTTCCGGCCGCTATCTGCTGGTGATCGGCCGCGACGCGCGGATCGACATGATCGACCTGTGGG CCAAGGAGCCGACCAAGGTCGCCGAGATCAAGATCGGCATCGAGGCGCGCTCGGTGGAAAGCTCCAAGTTCAAGGGCTACGAGGACCGCTACACCATCGC CGGCGCCTACTGGCCGCCGCAGTTCGCGATCATGGACGGCGAGACCCTGGAGCCGAAGCAGATCGTCTCCACCCGCGGCATGACCGTAGACACCCAGACC TACCACCCGGAACCGCGCGTGGCGGCGATCATCGCCTCCCACGAGCACCCCGAGTTCATCGTCAACGTGAAGGAGACCGGCAAGGTCCTGCTGGTCAACT ACAAGGACATCGACAACCTCACCGTCACCAGCATCGGTGCGGCGCCGTTCCTCCACGACGGCGGCTGGGACAGCAGCCACCGCTACTTCATGACCGCCGC CAACAACTCCAACAAGGTTGCCGTGATCGACTCCAAGGACCGTCGCCTGTCGGCCCTGGTCGACGTCGGCAAGACCCCGCACCCGGGGCGTGGCGCCAAC TTCGTGCATCCCAAGTACGGCCCGGTGTGGAGCACCAGCCACCTGGGCGACGGCAGCATCTCGCTGATCGGCACCGATCCGAAGAACCATCCGCAGTACG CCTGGAAGAAAGTCGCCGAGCTACAGGGCCAGGGCGGCGGCTCGCTGTTCATCAAGACCCATCCGAAGTCCTCGCACCTCTACGTCGACACCACCTTCAA CCCCGACGCCAGGATCAGCCAGAGCGTCGCGGTGTTCGACCTGAAGAACCTCGACGCCAAGTACCAGGTGCTGCCGATCGCCGAATGGGCCGATCTCGGC GAAGGCGCCAAGCGGGTGGTGCAGCCCGAGTACAACAAGCGCGGCGATGAAGTCTGGTTCTCGGTGTGGAACGGCAAGAACGACAGCTCCGCGCTGGTGG TGGTGGACGACAAGACCCTGAAGCTCAAGGCCGTGGTCAAGGACCCGCGGCTGATCACCCCGACCGGCAAGTTCAACGTCTACAACACCCAGCACGACGT GTACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACCCGCGTGCGGGGCACGCCCCGCACGCTCCCCCCTACGAGGAACCGTGATGAAACCGTACGCACTGCTTTCGCTGCTCGCCACCGGCACCCTGCTCGC CCAGGGCGCCTGGGCCGAAGACCCCGAAGTGCTGTTCAAGAACAAGGGCTGCGTGGCCTGCCATGCCATCGACACCAAGATGGTCGGCCCGGCCTACAAG GACGTCGCCGCCAAGTTCGCCGGCCAGGCCGGCGCCGAAGCGGAACTCGCGCAGCGGATCAAGAACGGCAGCCAGGGCGTCTGGGGCCCGATCCCGATGC CGCCGAACGCGGTCAGCGACGACGAGGCGCAGACCCTGGCGAAGTGGGTCCTGTCGCAGAAATGAACGCCCCTCCGGACTTCCGGCGCGCCGCCAGCCAC GCCTTGTGGCTGGCCCTCGCGCTGACGTTCGCCTGTCCTCTTCCGGGCCTGGCCGACGAGCATCCCGATGCCCGTCGCCAGGCCCAGTTGCGTCACCTGC
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| Amino Acid Sequence |
>nitrite reductase
MPFGKPLVGTLLASLTLLGLATAHAKDDMKAAEQYQGAASAVDPAHVVRTNGAPDMSESEFNEAKQIYFQRCAGCHGVLRKGATGKPLTPDITQQRGQQY LEALITYGTPLGMPNWGSSGELSKDQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVI DTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQT YHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGAN FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLG EGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDPRLITPTGKFNVYNTQHDVY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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