Strain | Pseudomonas aeruginosa strain MRSN 20176 scaffold00001, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGCTTCCCGCGGACCATCCCGCAGGCCGAAGCGCTGAAGGACGCCGGCGTGACCATCGACCACGTGGTCGAGATCGCCGTCGACGACGAGGAGATCGTG TCGCGTATCGCCGGTCGTCGCGTGCACCCGGCCTCCGGCCGCGTGTACCACACCGAGCACAACCCGCCGAAGGTCGCCGGCAAGGACGACGTTACCGGCG AAGAGCTGATCCAGCGCGAGGACGACAAGGAAGAGACCGTGCGTCACCGCCTGTCGGTCTACCATTCGCAGACCAAGCCGCTGGTCGACTTCTACCAGAA GCTGTCGGCCGCCGAAGGCACCCCGAGATACCACAGCATCGCCGGCGTCGGCTCGGTCGAACAGATCACCGCGAAAGTGCTTTCGGCCCTGAGCTGATCC GCAGCGCTGTAGCACCGACGGCCCGCTTGCGGGCCGTCGGCGTTTCCGGGGCGGCGAAGGCTGGTACAATCGGCGTCTTTTTCACCACGCGGAACCGTCG
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DNA Sequence for Gene |
>TN45_RS04520
ATGTCCACTCTGTTGGCCCTGGATACCTCCACCGAAGCCTGCTCCGTCGCCCTGCTCCACGAGGGGCGGGCGCTCAGTCACTACGAGGTGATCCCGCGCC TGCACGCCCAGCGCCTGCTGCCGATGGTCCGCGACCTGCTCGACGAGGCCGGCGTCGCCCTGTCCGCGGTGGACGCCATCGCCTTCGGGCGCGGTCCGGG CGCCTTCACCGGCGTGCGCATCGCCATCGGCGTGGTCCAGGGCCTGGCCTTCGCCCTGCAGCGCCCGGTACTGGCGGTCTCCGACCTGGCGATCCTGGCC CAGCGGGCCTACCGCGAGCAGGGTGCGGAGCGGGTCGCCGCGGCCATCGACGCGCGGATGGACGAGGTCTACTGGGGTTGCTACCAGTTGCAACAGGGCG AGATGCGCCTGGCCGGCAGCGAAGCGGTACTGCCGCCCGAGCGGGTCGCCGTACCGTGGGACGCCGCTGCCGCGGACTGGTTCGGCGCCGGCACCGGCTG GGGCTACGTCGAGCGCATGCCGCAGCGCCCGGCCGCGCTGGACGCGAGCCTGCTGCCGCATGCCGAGGACTTGCTCAGCCTGGCCGGCTTCGCCTGGGCG CGCGGCGAAGGCGTGGAGGCGGAACAGGCGCTGCCGGTGTACCTGCGCGACAACGTGGCGACGCCGAAAAAAGCGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAATGCCGCGCAGCGGTAATTGCCAAGCCTTTCGGGGCTGGCTAGAGTGTGGAGACTTCCCCGGGTTTTGATCATGCGTATCGACGGACTTTCTTCCTCT TCGTTGCCGCTGGAGCGCAGCGCCCGACCGGGCTCGGCGGTCACGCCGTATCGCGACGTGCAGCGCGAGGTCGAGGCGCGGCGCGAGCAGCCGGCGCCGG TTTCCGGCAGCCAGGGCTTCGAGCAGGCGCCGCAGGCGCGCAAGGTCCAGGCCAGTTCGGCGGGCGGCGACAGCCTGCCGGTGAGCGCCCGCGACCTGCT GGCGTTCCAGCGCCCGGTAAGCAGCCATGCGGCGATGGCCCTGGCCAGCTACAACTCCACCGCCAGCCTCAACATCGACGCCGGCGCCGAGGATGTCCTC GGCCTCGACCTCTACGCCTGAGCGGCTCCGCGCGCTCCCGTGGTTTCCCTTCCTTATTTCCTCGGTTGTCCATCCTGGAACGAGGCGGCCTGGCGCGGCA
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Amino Acid Sequence |
>hypothetical protein
MSTLLALDTSTEACSVALLHEGRALSHYEVIPRLHAQRLLPMVRDLLDEAGVALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALQRPVLAVSDLAILA QRAYREQGAERVAAAIDARMDEVYWGCYQLQQGEMRLAGSEAVLPPERVAVPWDAAAADWFGAGTGWGYVERMPQRPAALDASLLPHAEDLLSLAGFAWA RGEGVEAEQALPVYLRDNVATPKKAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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