Pseudomonas aeruginosa MRSN 20176, TN45_RS03485
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain MRSN 20176 scaffold00001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCTGCGGCTCGGCGAGCGCCACGACATCGCCCTGCGCCGCGACCTGTTCCGCTACTACCACAGCGACGCGCAGTCGGCGATCGCCGCCGGCCACGACA CCCGCGCCGCGCTGCTGGCGTTCGGCTGCGACGCCACCCACGGCTACGAGCGCACGCACATCGACAGCCTCGCCGCGCTGAGCCGCCTGCTCACTGCCTA CATCCTCAGCCCGCCGGTCTTCGCCAGCGACGCCAAGCCCCGGGAAACCTCGCTGGAACGCTTCAACAAGCAGCTCGAGCATCCGGTGCACATGGAAAGC TGCACCCACGTCCCGCCGGTGGACGAAGTGCTCGACAGCAGCAACAACAGCGACAAGGGCTGAGCCCGCGCCGGCCTCCCCGCCCCCCGGGGAGGCCGCC CTCCTCTCCAGCCAACTGCTAGGCTGATGGCAGGTTCCCTCGCCTGTCTCATTTCCTCCGTAGCATCATGCGTGCCGACTCGTGTCCATGGAGTAGTTGC
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| DNA Sequence for Gene |
>TN45_RS03485
ATGTCCCGACTCTGCCTGGTCCTGCTGTTGCTCTGCTGCGCGCTGCCGGCCCGGGCGCAGCCGCCCGCACCGCTGGACGGAGAGGACCTGCGCCTGTCCC TGGGCGCATACGCCGAGTACTACCGCGACGCCGGCGGCAAGGCGCGCCTGGGCGACATCCTCGCCTTGCCGGCCCAGGCCTTCACCGCCCTGCGCGGCGA CCACGCGAACTTCGGCAAGAACGCCGCGGCCTGGTGGTTCAGGGTGCGCCTGGACAACCGCAACGGCGCCGACCTGGCCGGTTTCCTGGAGGTCAACTAC CCGCTGCTGGACGACCTCAAGGTCTACCTGCTGACCGCCGATGGGCGCATCGAACAGCAGGAGAGCGGCGACCTGTTCGCCTTCTCCCAGCGCCCGGTGC AGGTGCGCAACTTCTGGTTCCCGCTGCGACTGCCGCCCGGCGAGAGCACCCTGCTGCTGCGCGTGCAGAGCAGCAGCACCGTCTACCTGCCGCTGTACTT CAGCACCTACGCGGCCAGCGCGGCCAGCCAGGAAACCCTGATGGGCTTCAACGGGGCCTTCTACGGGGTGCTGTTCGGGTTGTTCTGCTACAACCTGTTC CTCTTCGTCTCGCTGCGCGAGGCCACCTACGCCTGGTACCTGCTGTACAACCTCAGCCTCGGCCTGTTTTCCGCCAGCTTCGACGGCCTGCTGTTCAAGC TGCTGCCAGGACACGTGGCGCTGGAGTCGGCCGGCATCTACCTGCTGATGTACCTGAGCTGCCTGGTGTCGATCCAGTTCAGCCGCGGCTACCTCTACAC CCGCCGCGACTTCCCGCGCCTCGACCGCTTCCTCCGCGGCATGCTGCTGGCCTGCGTGGCCCTGTTGGCCAGCGAGCCGCTGGTGGGGTTGCGCGCCTGG AACGTCCTCGCCAGCCTGACGGTGATGCTGGTATCCCTCAGCCTGCTGCTGGCCGGCGTCCACGTCTGGCGCCAGGGCCTGCGCTACGGCCTCTACTACA TCCTGGCCTGGGGCGCGCTGCTGCTGTCGTTCCTGGTCACCACCGCCGCCTCGCTGGGCTTCGAACTGTTCGGCCTGTTCGGCAGCAGCGTGGTCAAGAT CGGCATGACCGTGGAACTGGTGACCCTGTCCATCGGCCTCGCCGACCGCATCAATGCGCTCAAGGAGGAAGGCTTCCGCTCGCGCCAGGCGGCCGAGCAG GCGCGGGTGGAGAACGAGGCGAAGAGCCGCTTCCTGGCGAAGATGAGCCATGAGATTCGCACCCCGCTGAACGGCGTGCTGGGCATGCTGCAACTGCTCC GCGATACCCCGCTGGATCGCGGCCAGGCGGCCTACGTGGAGACCATCGCCAGCTCCGGCAGCGCGCTGATGTCGGTGATCAACGATATCCTCGACTACGC TCGCATCGAGTCCGGCAAGCTGCACCTGGAGCGCATCGACTTCGACCTGGAGGAACTGCTCTCCGACACCCTGGCGCTGTTCAGCGCCCAGGCCGTGGAA AAACGCCTGCGCCTGCATCTCGGCCTGGACAGGGGCGTGCCGCGCCGCCTCAACGGCGACCCGACGCGGTTGCGCCAGGTACTGATGAACCTGCTCAGCA ACGCCCTCAAGTTCACCGCCGAAGGCCATGTCGCCGTGCGCGTGCAGCGGCGCTTCGACGAGGGCGGACGCGAGCGCCTGCTGTACAGCGTCAGCGACAG CGGCATCGGGATATCCGCCCAGGCGCAGAAGACCCTGTTCGAATCCTTCTCCCAGGCCGACTCCAGCACCACCCGCCGCTACAGCGGCAGCGGCCTGGGC CTGGCGATCAGCCGCGAGCTGGTGCAGATGATGGGCGGGCGCATCGAGGTGAGCAGCGAGCCGGGCAAGGGCACCCGGTTCAGCGTCGACCTGCCGCTCA GCCCCGCCCTCGAGGCCGGCGAAGCGGACGAACTGGCGCAACTGCTGCAACACCGTCCGGCCCTGCTGGCCAGCGAGGACAACCTGACCCTGGACTGCCT GCAGGCATTGCTGGAGCGTTGGGGGCTGCGGGTCGAACGCTGCCTGCAGCCGAGACGGCTGAACGCCTACCTGGAGGACTTCAGCGCACCGCCCCTGCTG GTCCTGGCGGCGCCCTGGCCGGGCCCGCCGTCGATCTGGCTGGACACCCTCTATGCGCAACTGGAGCAAGGCCAGCGCATCCTCCTGCTATGCCCGCCGC AGCACTGCCAGGACCTGCCGCCGCACGAAGGCCTGCGCCTGCTGGCCCTGGCCCAGCCGGTGGCGGTGAAGGCCCTGCGCGAAGCCCTGCTGGAACTGTA CCGGGAGCGGCGCCGACAGCCAGGGCGGAGCAGCGAGGCGGCCCCGGACGAACGCCTGGACGCCCCATGCATCCTGGTCGCCGAGGACAACCCGGTGAAC CAGCTGGTGGTGCGCGGCTTCCTCGCCAAGCGCGGCTACGCGGTGCGCCTGGCCGGCAACGGACGGCTCGCGCTGGACGAGTACCTGCGCGACCCGAACG GCATCCAGTTGATCCTGATGGATGGCGAGATGCCGGAAATGGACGGCTTCGAGGCGACCCGCCTGATCCGCCGGGAGGAGCGTGCCCAGGGCTGGCCGCG CGTCCCGATCGTCGCCCTGACCGCGCACATCCTCGACGAACACCGCCGGGCCGGAATCGAGGCCGGCATGGACGCCTACCTCGGCAAGCCGGTGGACCGG GCGGAACTCTATGCCACCCTCGAACGCCTGCTCGGCCAGCCTTCGCGACAGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGTACGCGATGCGTCGCGCTAGCATTCGCCGCCATACCGGAGTACCGCCATGCTGATCCCCCACGACCTGCTCGAAGCCGACACCCTGAACAACCTGCT GGAAGACTTCGTCACCCGCGAAGGCACCGACAATGGCGACGAGACCCCGCTGGACGTGCGTGTAGAACGCGCCCGGCATGCCTTGCGGCGGGGCGAGGCG GTGATCCTGTTCGACCCGGAGAGCCAGCAGTGCCAGTTGATGTTGCGCAGCGAGGTGCCTGCGGAGCTGTTGCGCGACTGAGTCGCGGTATCGACCCGCC TGGCGAGACGGGTTCGCCGCCCTGCACACCCCGGAAACGCCGGACAGCGCCCCCGCTCCGTAGGGCGAATAACCGCTCGCGGTTATCCGCCCGCCCCCTC ACTCCTTCGCCCCACCCTCCTCCGTCTCCAACGCCGCCCTGGCGATGTTCCGGCTATGCGCGCCGAAATGCCCGATCAGTTCGATCAGTTGCGCGTTCAG
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| Amino Acid Sequence |
>sensor histidine kinase
MSRLCLVLLLLCCALPARAQPPAPLDGEDLRLSLGAYAEYYRDAGGKARLGDILALPAQAFTALRGDHANFGKNAAAWWFRVRLDNRNGADLAGFLEVNY PLLDDLKVYLLTADGRIEQQESGDLFAFSQRPVQVRNFWFPLRLPPGESTLLLRVQSSSTVYLPLYFSTYAASAASQETLMGFNGAFYGVLFGLFCYNLF LFVSLREATYAWYLLYNLSLGLFSASFDGLLFKLLPGHVALESAGIYLLMYLSCLVSIQFSRGYLYTRRDFPRLDRFLRGMLLACVALLASEPLVGLRAW NVLASLTVMLVSLSLLLAGVHVWRQGLRYGLYYILAWGALLLSFLVTTAASLGFELFGLFGSSVVKIGMTVELVTLSIGLADRINALKEEGFRSRQAAEQ ARVENEAKSRFLAKMSHEIRTPLNGVLGMLQLLRDTPLDRGQAAYVETIASSGSALMSVINDILDYARIESGKLHLERIDFDLEELLSDTLALFSAQAVE KRLRLHLGLDRGVPRRLNGDPTRLRQVLMNLLSNALKFTAEGHVAVRVQRRFDEGGRERLLYSVSDSGIGISAQAQKTLFESFSQADSSTTRRYSGSGLG LAISRELVQMMGGRIEVSSEPGKGTRFSVDLPLSPALEAGEADELAQLLQHRPALLASEDNLTLDCLQALLERWGLRVERCLQPRRLNAYLEDFSAPPLL VLAAPWPGPPSIWLDTLYAQLEQGQRILLLCPPQHCQDLPPHEGLRLLALAQPVAVKALREALLELYRERRRQPGRSSEAAPDERLDAPCILVAEDNPVN QLVVRGFLAKRGYAVRLAGNGRLALDEYLRDPNGIQLILMDGEMPEMDGFEATRLIRREERAQGWPRVPIVALTAHILDEHRRAGIEAGMDAYLGKPVDR AELYATLERLLGQPSRQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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