Strain | Pseudomonas aeruginosa strain FRD1, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGCGGTTGGCCTGCTGGAAGAGATCGAGGCCTGGCCGCAGGGCTGGGACAGCGATGTCGGCCCCGGCGGCGCGCTGCTGTCCGGCGGCCAGCGGCAACGC CTGTGCCTGGCTCGCGGGCTGCTCTCGGCAGCGCCGTTGCTGCTGCTCGACGAGCCCACCGCCAGCCTCGATGCAGCCAGCGAGGCGCAGGTGCTGCGCA GCCTGCTCGGGTTGCGCGGCCGGCGCACCCTGCTGGTAGTGACCCACCGCCCGGCGCTGGCGCGTCAGGCCGACCAGGTACTGCTGCTGGAGAAGGGGCG GCTGCGCCTGAGTGGACGTCACGCCGATCTGCTCGTCCGGGACGACTGGTATGCCGGCTTCGTCGGGCTGGCGGGCGAGGAAAGTTCCGCGACGGCCGTG GATCGATAGAGAAAGACCGGCAATCGAAAAAGCCCCGGAGATGATTTCTTCATAATGATAAGCATTATCAAATCGTATATCCCCCGAGGCTGTTCGAACG
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DNA Sequence for Gene |
>EG09_RS15700
ATGAAAACGGAGACGAAGGTGATCAAGGGACGCCAGGGCATCGCCCGCAATCGGCACACCCCGTTGTGCCTGGGCCTGCTGCTGGCGCTGAGTCCGCTGG CCGCGGCCGTGGCCGACGCGCGCAAGGACGGCGAGACGGAACTGCCGGACATGGTGATCAGCGGAGAAAGCACGTCCGCCACCCAGCCGCCGGGGGTGAC TACCCTGGGCAAGGTGCCGCTCAAGCCGCGCGAGCTGCCGCAGTCCGCCAGTGTCATCGACCATGAGCGCCTCGAACAGCAGAACCTGTTCAGCCTCGAC GAAGCCATGCAGCAGGCCACCGGGGTCACCGTGCAGCCGTTCCAGCTGCTGACCACCGCCTACTACGTGCGCGGCTTCAAGGTCGACTCCTTCGAGCTGG ACGGGGTGCCGGCACTGCTCGGCAATACCGCCAGTTCGCCGCAGGACATGGCGATCTACGAGCGGGTCGAGATCCTCCGCGGCTCCAACGGACTGCTGCA TGGCACCGGCAACCCGGCGGCCACCGTCAACCTGGTGCGCAAGCGGCCGCAGCGCGAGTTCGCCGCCAGCACCACCCTCAGCGCCGGGCGCTGGGACCGC TACCGCGCCGAGGTCGACGTCGGCGGCCCGCTGAGCGCCAGCGGCAACGTGCGCGGCCGAGCGGTGGCCGCCTACGAGGACCGCGACTACTTCTACGACG TGGCCGACCAGGGTACCCGCCTGCTCTACGGGGTGACCGAGTTCGACCTGAGCCCCGACACCCTGCTCACCGTCGGTGCGCAATACCAGCACATCGACTC GATCACCAACATGGCCGGGGTACCGATGGCCAAGGATGGGTCCAATCTCGGACTGTCCCGCGACACCTACCTCGATGTCGACTGGGACCGCTTCAAGTGG GACACCTACCGCGCCTTCGGCTCCCTCGAACAGCAACTGGGCGGCGGCTGGAAAGGCAAGGTCAGCGCCGAATACCAGGAAGCCGATTCGCGCCTGCGTT ACGCCGGCTCCTTCGGCGCCATCGACCCGCAGACCGGCGACGGTGGCCAGCTGATGGGCGCCGCCTACAAGTTCAAGAGCATCCAGCGCAGCCTCGACGC CAACCTCAATGGGCCGGTGCGACTGTTCGGCCTGACCCACGAACTGCTCGGTGGGGTCACCTACGCCCAGGGCGAGACCCGCCAGGACACCGCACGCTTC CTCAACCTGCCGAACACCCCGGTCAATGTCTACCGCTGGGACCCGCACGGCGTGCCGCGCCCGCAGATCGGCCAGTACACTTCGCCGGGCACCACCACCA CCACCCAGAAAGGCCTCTATGCCCTGGGCCGGATCAAGCTCGCCGAGCCGCTGACCCTGGTGGTCGGCGGCCGCGAAAGCTGGTGGGACCAGGACACCCC GGCCACCCGCTTCAAGCCCGGTCGCCAGTTCACGCCCTACGGCGGGCTGATCTGGGACTTCGCCAGGGACTGGTCGTGGTATGTCAGCTACGCCGAGGTC TACCAGCCGCAGGCGGATCGCCAGACCTGGAACAGCGAGCCGCTGAGCCCGGTGGAAGGCAAGACCTACGAAACCGGGATCAAGGGCGAACTGGCCGACG GCCGCCTGAACCTGTCGCTGGCGGCGTTCCGCATCGACCTGGAGAACAATCCGCAGGAAGACCCGGACCATCCGGGGCCGCCCAACAATCCGTTCTACAT CAGCGGCGGCAAGGTGCGCAGCCAGGGCTTCGAGCTGGAAGGCACCGGCTACCTGACGCCCTACTGGAGTCTCTCGGCCGGCTACACCTACACCAGCACC GAGTACCTCAAGGACAGCCAGAACGACTCGGGGACGCGCTACTCCACCTTCACCCCGAGGCACCTGCTGCGCCTGTGGAGCAACTACGACCTGCCCTGGC AGGATCGGCGCTGGAGCGTCGGCGGCGGACTCCAGGCGCAGAGCGACTACAGCGTCGACTACCGCGGCGTGAGCATGCGCCAGGGCGGCTACGCACTGGT CAACATGCGCCTGGGCTACAAGATCGACGAGCACTGGACGGCGGCGGTCAACGTCAACAACCTGTTCGACCGGACCTACTACCAGAGCCTGTCCAACCCC AACTGGAACAACCGCTACGGCGAACCGCGCAGCTTCAACGTCAGCCTGCGGGGCGCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCCGCGCCAGTCGGGCTTCGGCTGGGCCTGGCGGGTTCCGCTGGCGCTCGCCGGCAGCCTGGCGGCGGCGACCGCCAGCGGCTATCTGTTGACTCGCGG GCTGCCCCTGGACGACCCGCTCGAGCGTCTCTACGCCGGGCTCTTCGGCGCGCTCGGGGTGGGCTTGTTGCTGCTTGTCGGCGGGTTGCTGGCGCGTGGT CCGGGCAACTTCGCCTGGCGCCTGGGCGGTAGCCTGCTGGTACTGGGCCTGGCGTTGTGGCTGCTGGCGGGGCGCGGTTGAAGTGGCGGCGCGTCCTCTC CTGCTCTCGCTGCACGGTGGCGCCGGCGCGCTGTTCGGCGTGTTGCTGTTCGTGGTGCTGTTCAGTGGCGCCTGGAGTCTTGGCCACGACGACCTGCGCG AGTGGCTGCGGGCCCCGGCGCAGGCGGGAGGAGAAGCCCTTGCGCTGGAGCGCCTGCTCGAACGGGCGGGCGAGGAAGGCGTCGACATCCGCGATGCGAC
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Amino Acid Sequence |
>Fe(3+)-pyochelin receptor
MKTETKVIKGRQGIARNRHTPLCLGLLLALSPLAAAVADARKDGETELPDMVISGESTSATQPPGVTTLGKVPLKPRELPQSASVIDHERLEQQNLFSLD EAMQQATGVTVQPFQLLTTAYYVRGFKVDSFELDGVPALLGNTASSPQDMAIYERVEILRGSNGLLHGTGNPAATVNLVRKRPQREFAASTTLSAGRWDR YRAEVDVGGPLSASGNVRGRAVAAYEDRDYFYDVADQGTRLLYGVTEFDLSPDTLLTVGAQYQHIDSITNMAGVPMAKDGSNLGLSRDTYLDVDWDRFKW DTYRAFGSLEQQLGGGWKGKVSAEYQEADSRLRYAGSFGAIDPQTGDGGQLMGAAYKFKSIQRSLDANLNGPVRLFGLTHELLGGVTYAQGETRQDTARF LNLPNTPVNVYRWDPHGVPRPQIGQYTSPGTTTTTQKGLYALGRIKLAEPLTLVVGGRESWWDQDTPATRFKPGRQFTPYGGLIWDFARDWSWYVSYAEV YQPQADRQTWNSEPLSPVEGKTYETGIKGELADGRLNLSLAAFRIDLENNPQEDPDHPGPPNNPFYISGGKVRSQGFELEGTGYLTPYWSLSAGYTYTST EYLKDSQNDSGTRYSTFTPRHLLRLWSNYDLPWQDRRWSVGGGLQAQSDYSVDYRGVSMRQGGYALVNMRLGYKIDEHWTAAVNVNNLFDRTYYQSLSNP NWNNRYGEPRSFNVSLRGAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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