Pseudomonas aeruginosa FRD1, EG09_RS09570
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain FRD1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAGGACAACCAGTACCTGCTGGAGGCGCCGGCCTACCGCGCCGCCAACCGCAGTTTCAAGGACGTGTCCGAGCTGCGCCTGCTGAAATTGTCGGAAGCCG ACTATCGACGCCTGCTGCCGTTCGTCAGCGCCTTGCCCGAAGATGCGCCGCTGAACGTGAACACTGCCAGCGTGCCGGTGCTGGCCGCCATGTTCGAGAT CGATCCGGGACAGGCGGAAAACATCGTGGACGCCCGCGGTCGGGAAGGTTTCCAGAGCAAGGACGATTTCACCAAGCATCTGACCCAGTTGGGTTCGAAG ACCGGAAACGTCAGTTATGCCGTCGGCACCCGCTACTTCCAGGTGATCAGCGAGGTCAGCCTGGGCGACCGCCGGCAGGTGCTGGTGAGTACCTTGCAGC GGGGCAAGGACGGCAAGATACGCGTGATGGCCCGCGACATGGGGCAGGGCGGCCTGCCCATCCCGTCGACGGGCGGCGACGATTGGAAGAAGGACGAGCG
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| DNA Sequence for Gene |
>EG09_RS09570
ATGAGTGGAGTGAGTGCGCTGTTCCTGCCGCCCGCCAGCACGGCGGGGGCCGATGGGGAACTGGCGGTGTGGTGGGTGCAGGATGGCGAGTGCCGGCGCG CGCCGTTCGCCCAGGCGCTGGCGGAGATCCGCGCGCCCTGGCGGCTGTACCTGCCGGTGGAGGCGGTGACCGCCTGCGCGGTGAACCTGCCTACACAGAA GGCGCGCTGGTTGCGCCAGTCGCTGCCGTTCGCGGTGGAGGAACAACTGGCCGACGATGTCGAGCAGATGCACCTTGCCCTTGGTCCGGCGCTGGCCGAC GGCCGCCACCGGGTATTCGCCGTGCAGCGCACCTGGCTCGCCGCCTGGCTGGCGCTGGCCGAGGGCGCGGGCAAGGCGCCGGCTTCGCTGCATGTCGATG CCGATTGCCTGCCGGGCGAGGGCAGTTGCCTGTTCTGGCTGGAAGAGCGCTGGTTGCTCGGCGGCAGCGGCGCCGTACGCCTGGCCTGCGGCAGCGAGGA TTGGCCGGTACTGCGCGACAGTTGCCCGCCGCCGCAGCGGGCCTTCGCCGCGCAGGAGGTGGCGCCCCTGGAGGGGGTGGAAGTCCAGGCCCTGGCGGGC AATCCGCACGTCTGGCTGAGCGAGCAGCCGCTGGGCACCGACCTGGCCCAGGCCGAGTTCGCCGCGCGCCAGCAGAGCAGCCAGTGGCGCCGCTGGCGGC CGCTGCTGGGGTTGGTCGGGCTGTGGTTGGTATTGCAATGGGGCTTCACCCTGGTCCAGGCCTGGCAGTTGCAGCGCGAAGGCGACCGCTACGCGGCGCA GAGCGCAGAACTCTACCGCCAGTTGTTTCCCGAGGACCGCAAGCTGATCAACCTGCGCGCGCAGTTCGACCAGCACCTGGCCGACAGCGCCAGCAGCGGC GGCGAGGGCCAGTTGCTCGGCCTGCTTGGCCAGGCCGCCACGGTGATCGGCGGCGAGCCGACGGTGAGCGTCGAGCAACTGGACTTCAGCGCCGCTCGCG GCGACGTCGCCCTCCAGGTGCGGGCTCCCGGTTTCGACGTGCTGGAACGGCTGCGTTCGCGTCTCAGCGAGTCCGGGCTGGCGGTGCAGCTGGGTTCGGC CAGCCGCGATGGCTCGACGGTCAGCGCGCGCCTGGTGATAGGAGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GATGAAGGTGATGACGCAATTCCACGAGCGCCTCAGGGCCCAGGCGGAAACCTCGCAGCTGGCGATCCGCTGGCGCGGGCTGCCGGCGCGGGACCGCCTG GCGCTGCTCTGGCTCGGCGCGTTCCTCCTGCTGGTGGTGCTTTACCTGGCGCTGTGGCGCCCGGCCGAGCGCCATCTGCAGTCGGCGCGGCAGTACTTCA CCGAACAGCGCGCGCTGCATGCCTACATCCAGCAGCAGGCGCCCAACGTGCGCCAGGCCGATGCCGCGGCGCCACAGGCGCAGATCGACCCGGCGGCGCT GCAGGGCATGGTCACGGCTTCGGCGGCCCAGGCCGGACTGAGTGTCGAGCGCCTCGACAACGAAGGCGAGGGCGCCGTGCAGGTGGCCCTGCAGCCGGCG CCATTCGCCAAGCTGCTGCCCTGGCTGGAGCAGTTGAACGGGCAGGGCGTGCAGGTGGCGGAGGCCGGCCTGGACCGCCAGGTCGACGGCCGGGTCTCGG
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| Amino Acid Sequence |
>type II secretion system protein L
MSGVSALFLPPASTAGADGELAVWWVQDGECRRAPFAQALAEIRAPWRLYLPVEAVTACAVNLPTQKARWLRQSLPFAVEEQLADDVEQMHLALGPALAD GRHRVFAVQRTWLAAWLALAEGAGKAPASLHVDADCLPGEGSCLFWLEERWLLGGSGAVRLACGSEDWPVLRDSCPPPQRAFAAQEVAPLEGVEVQALAG NPHVWLSEQPLGTDLAQAEFAARQQSSQWRRWRPLLGLVGLWLVLQWGFTLVQAWQLQREGDRYAAQSAELYRQLFPEDRKLINLRAQFDQHLADSASSG GEGQLLGLLGQAATVIGGEPTVSVEQLDFSAARGDVALQVRAPGFDVLERLRSRLSESGLAVQLGSASRDGSTVSARLVIGG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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