Pseudomonas aeruginosa FRD1, EG09_RS00535
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain FRD1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AATACCCCGGTCGAAGGCATGAAGCCGCGTACCGCCCTGGAACTGGAAGGTCGCGACATCTACATCCGCGAAGGCTGCGTCGGCTGCCACTCGCAGATGG TCCGTCCGTTCCGTGCCGAGACCGAACGCTACGGCCATTACTCGGTCGCCGGTGAAAGCGTCTGGGACCACCCGTTCCTGTGGGGTTCCAAGCGTACCGG CCCGGACCTGGCCCGCGTCGGCGGCCGTTACTCCGACGACTGGCACCGCGCGCACCTGTACAACCCGCGCAACGTGGTGCCCGAGTCGAAGATGCCTGCC TACCCGTGGCTGGTAGAGAACAAGCTTGATGGCAAGGACACCGCCACCAAGATGGAAGTCCTGCGCAAGCTGGGCGTGCCTTACACCGACGAGGACATCG CCGGTGCACGTGAAGCCGTGAAGGGCAAGACCGAGATGGACGCCCTGGTGGCGTTCCTTCAAGGCCTGGGAACCTCTATCAAGAGCAAACGGTGAGTGTG
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| DNA Sequence for Gene |
>EG09_RS00535
ATGGATATCGGGACTCTGCGTGGACTGGGCACCGTGGTGATCATGGTCGCCTTCATCGGCCTGGTGATCTGGGCCTACAGCGGCAAGCGCAAGAAGAGCT TCGACGAAGCGACGATGCTGCCCTTCGCAGACGATCCCGAAGCCAAAAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGACCTTCTGGAGTCTGTACATTACAGCTCTCACCCTCGGCACCCTGCTGGCGCTGACCTGGCTGATCTTCGCCACCCGCAAGGGCCAGCGCAGCAGCAC CACCGACGAGACCGTGGGCCACTCCTACGACGGCATCGAGGAGTACGACAACCCGCTGCCGAAGTGGTGGTTCATGCTGTTCGTCGGCACCCTGGTGTTC GCCGTGGGGTACCTGGCCCTGTACCCGGGCCTGGGCACCTGGAAAGGCCTGATGCCGGGCTACCAGTCCGCCGACGAATTCGCCGACAAGGAAAAAGGCT GGACCGGCGTCCACCAGTGGGAAAAGGAAATGGCCAAGGCCGACGAGAAATACGGCCCGATCTTCGCCAAGTTCGCCGCGATGCCCATCGAGGAAGTCGC CAAGGATCCGCAGGCGGTGAAAATGGGCGGTCGCCTGTTCGCCTCCAACTGCTCGATCTGCCACGGCTCCGACGCCAAGGGCGCCTACGGCTTCCCCAAC
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| Amino Acid Sequence |
>cytochrome C oxidase cbb3-type subunit CcoQ
MDIGTLRGLGTVVIMVAFIGLVIWAYSGKRKKSFDEATMLPFADDPEAKKHVEQASRSNKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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