Strain | Pseudomonas aeruginosa DNA, complete genome, strain: NCGM 1900. [Details] | |
DNA Sequence Upstream of Gene |
CCAGTTGCCGCGACGGGTGCAGTTTTTGCTGGGCGAAGCGGATGCGCCGCTTGGCGCCGCCTTCCAGGCGGTCGATGTCGTAGCCGAGGGCGCGCAGGCG GTCGCTGTAGACCAGGTGCTCGCGGCTGTGGTGGCCTTCCTGGCCGATGAAGCCACGGATCTGCTGCTTCAGCGCCGGGTCCTCGACCCGCTCGCGGTAG TGGCGCACGGAGTCGATGAAGAAGCGCTCGCCATCGGGGAACAGCACCGACATGGCGTTGAACATGTGGGTCTTGAAAGCGTCGCCGCTGTGCCAGTGGC GCGGCATCGGATCGGGCAGGTCGAAGTCCAGATGACGCGGGCGGATCTCCAGACCTTCGGGGGTGGTGCTGGCCATAGCGGCTCCCTGTGATGGTGAAGG ACCATGGGATCGACTATCGCTTGCGGGGGGTAGCCTCACAAGGTTATCTTCTGCCAACTTTCCGGTCATATCCGGCCAGCGGTCAGAACAATAAACAGCC
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DNA Sequence for Gene |
>NCGM1900_RS09390
ATGAAACAACCGCTCAATTTCACCGCCGAACTGGTGCCGGTGGCCTATGCCGAGGCACTCCTCGATCTCGTCGCGGAGTACGGCGTATCCCGCCAGGCGC TGTTCGACGCTGCGCGGGTGCGTCCCGAGGTGCTGGACAGCCCGAACGGCCGCCTGTCCTTCCTCGACTTCAACCAGCTCACCTACAGCGCCCAGGCCCT GTGCGGCGAGCCGGCGCTGGGGCTGGTGCTCGGCCAGCGCCTGAACGTCTCCGCCCATGGCATCCTCGGCTACGCGGTGCTGTCCAGCGCCAACCTGGGC AAGGCCATCCAGTTCGCCCTCAAGTACTACCGGGTGCTCGGCCTGGCCTACGAACTGGAACTGGTGCTCGATGACGGCCGCGCTGAGTTGCGCGCGGTGG AGTCGATGCCGCTGGGCGCCGCCTCGGTGTTCGCCGCCGAGGGCCTGATGGCGACGCTGTATTCCATCGCCTGCTTCCTGGTCGGCGAGCCGTTGCAGGA CGTGCGGGTCGGCTTCGCCTATCCGCCGCCGGCCCATGCCCGGCGCTACGCTGAGGTGTTCGGGGTGGCCGCGGAGTTCGAGCAGCCCTGGCACTGGCTG AGCATGCCCAGCGAGTACCTGGAACGACCGATGGCGCTGGCCAACCCGGCCACGGTGCAGATGTGCGAGCAGCAGTGCGAGGCGCTGCTGGCCACCCTGG ACGTCCAGGAAGGCCTGCTGACCCGTGTGCGCCGCCTGCTGCTGGCGCGTCCCGGCGACTTCCCCGATCTCGAACAGGCCGCCCGCGAACTGCACACCAG CGGGCGCAGCCTGCGCCGGCACCTGTCGTCGCTGGGCACCACCTACCAGCAGGTCCTCGACGATGTGCGCAAGCGCCTGGCCCTGCAATACCTGGCCACC ACCCAGCTACCGCTGTACGAGATCGCCCTGTTGCTCGGCTTCAACGATTCGTCGAACTTCCGCCGGGCGTTCCGCAAGTGGACCGGCAAGCTGCCCAGCG ACTACCGCGAAGCGCCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGACGCCGGCGATCCTCGGCAGCGGATGGATGTGCCATGCTTGGCGTTTCATAGAAATCCATGGCGCGCTTGCCGCGCCGACCGTGATCGGAGTCTTG CATGTCGACATCCCCCGCGCTGATCCGCGAAACCTTTCCCGTCGGGCCTTTGCAGTGCAACTGCACCATCATTGGCGATCCGCTGACCAGGAAGGCCATC GTCGTCGATCCGGGCGGCGACCACGAACTGATCCTGCAGCGCCTCGACCGCCTCGGCCTGCAAGTGGTCAGCATCATCCATACCCATGCGCACCTGGATC ACTTCCTCGCCTCCGGCGAGATGAAGAAACGCACCGGCGCCAGCCTGCACCTGCACAAGGACGACCAGTTCCTCTGGGACAACCTGGAGATGCAGTGCCA ACTGTTCGGCGTGCCCTACACGCCGGTGCCGGCCCCGGACCGCTGGCTGGCCGACGACGAGGAACTGGCCTGCGGTTGCGGAGTGGCACTGCACACGCCG
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Amino Acid Sequence |
>ornithine utilization regulator
MKQPLNFTAELVPVAYAEALLDLVAEYGVSRQALFDAARVRPEVLDSPNGRLSFLDFNQLTYSAQALCGEPALGLVLGQRLNVSAHGILGYAVLSSANLG KAIQFALKYYRVLGLAYELELVLDDGRAELRAVESMPLGAASVFAAEGLMATLYSIACFLVGEPLQDVRVGFAYPPPAHARRYAEVFGVAAEFEQPWHWL SMPSEYLERPMALANPATVQMCEQQCEALLATLDVQEGLLTRVRRLLLARPGDFPDLEQAARELHTSGRSLRRHLSSLGTTYQQVLDDVRKRLALQYLAT TQLPLYEIALLLGFNDSSNFRRAFRKWTGKLPSDYREAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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