Pseudomonas aeruginosa NCGM1984, NCGM1984_RS25985

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF08447
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 1 20 -
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 708 847 1.2E-10
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 837 960 4.89E-22
SMART SM00267 duf1_3 IPR000160 GGDEF domain 962 1138 2.1E-71
CDD cd00130 PAS IPR000014 PAS domain 721 837 1.09917E-5
FunFam G3DSA:3.30.70.270:FF:000001 Diguanylate cyclase domain protein - - 968 1140 5.3E-45
Pfam PF13426 PAS domain IPR000014 PAS domain 724 839 3.9E-6
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 702 838 1.82E-14
Pfam PF13426 PAS domain IPR000014 PAS domain 860 961 1.5E-16
SMART SM00086 pac_2 IPR001610 PAC motif 657 700 0.0065
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 852 968 5.1E-18
FunFam G3DSA:3.20.20.450:FF:000001 Cyclic di-GMP phosphodiesterase yahA - - 1149 1403 1.6E-104
CDD cd00130 PAS IPR000014 PAS domain 857 959 2.11541E-9
CDD cd00130 PAS IPR000014 PAS domain 589 697 2.04362E-8
Gene3D G3DSA:3.30.450.20 PAS domain - - 709 850 2.9E-21
CDD cd01949 GGDEF IPR000160 GGDEF domain 974 1136 1.52361E-62
SMART SM00086 pac_2 IPR001610 PAC motif 920 962 1.2E-5
SMART SM00091 pas_2 IPR000014 PAS domain 579 648 1.7E-5
Gene3D G3DSA:3.30.450.20 PAS domain - - 851 973 3.2E-31
SMART SM00052 duf2_2 IPR001633 EAL domain 1148 1394 4.5E-126
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 973 1134 1.2E-51
SMART SM00086 pac_2 IPR001610 PAC motif 798 840 7.4E-4
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 576 707 1.9E-10
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 283 381 3.77E-8
Pfam PF08447 PAS fold IPR013655 PAS fold-3 603 694 4.3E-14
SUPERFAMILY SSF55073 Nucleotide cyclase IPR029787 Nucleotide cyclase 978 1139 3.53E-50
Gene3D G3DSA:3.30.450.20 PAS domain - - 280 417 1.4E-8
Pfam PF00563 EAL domain IPR001633 EAL domain 1154 1389 2.1E-77
SMART SM00091 pas_2 IPR000014 PAS domain 848 915 6.1E-8
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 564 698 1.05E-16
SMART SM00091 pas_2 IPR000014 PAS domain 712 779 0.83
FunFam G3DSA:3.30.450.20:FF:000172 Cyclic di-GMP phosphodiesterase Gmr - - 850 974 1.3E-83
Pfam PF13188 PAS domain IPR000014 PAS domain 305 349 0.023
PANTHER PTHR44757 DIGUANYLATE CYCLASE DGCP - - 844 1400 0.0
Gene3D G3DSA:3.20.20.450 EAL domain IPR035919 EAL domain superfamily 1149 1403 1.4E-106
CDD cd01948 EAL IPR001633 EAL domain 1154 1394 1.30843E-112
SUPERFAMILY SSF141868 EAL domain-like IPR035919 EAL domain superfamily 1153 1400 5.1E-92
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 974 1144 2.3E-63
SMART SM00091 pas_2 IPR000014 PAS domain 292 358 0.025
NCBIfam TIGR00254 JCVI: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 970 1136 1.5E-40
MobiDBLite mobidb-lite consensus disorder prediction - - 1 18 -
Gene3D G3DSA:3.30.450.20 PAS domain - - 571 698 1.0E-18

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.