Strain | Pseudomonas aeruginosa DNA, complete genome, strain: NCGM 1984. [Details] | |
DNA Sequence Upstream of Gene |
GTTGGCAAGGAGCTGCGGCATCGACCCGTCCGGCCTGGCCGCCACCGTCGCCGAATACAACCGCCACGCCCGCGAGGGCCGCGACCCAGAGTTCGGCCGC GGCGGCACGGCATTCAACCGCAAGCAGGGCGACCCGGCGTATCCGGGGCCGAATCCCTGCGTCGCCCCCATCGAACGCGGACCGTACTACGCGGTGCAGG TCGAGCCCGGCTGCTTCGGTACCTTCGCCGGGCTGAAGACCGACGCCCAGGCCCGCGTGCTGGACGGCGGCGGCCAGCCGATCCCCGGCCTGTACGCGGC GGGAGCGGACATGGCGAGTCTGTTCGCCGGCCACTATCCCTCCGGCGGCATCAACCTGGGACCGGCGCTGACCTTCGGCTACATCGCCGGACGCCACATC GCCGGCGCCATCGGCTACGAGCAGGAGCAAGCGCAGCGCGGTTGAACGTTCCAACGGGCGCAGCGGCCTAAACAGGCAAGCTTTCCTTCGGAACCCAAGC
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DNA Sequence for Gene |
>NCGM1984_RS14920
ATGAGCGCAGCGCCACCGGAGATCCCCGCCCTGCCCGCCGGCCTCTGCTACGTCGACGACCGCCAGCCGGGCATCCGTCGACGCCGGCAGGGCAAGCGCT TCGTCTATTTCGACGCCAACGGCCAGCGCATCGGCGACGCCGAGGAAATCCGCCGGCTGGACAAGCTGGCCATTCCGCCGGCCTATCGCGAGGTCTGGAT CTGTCCCGACCCCAACGGCCATCTCCAGGCCACCGGCCGCGACGCCCGTGGGCGCAAGCAGTACCGCTACCACCCGCGCTGGCGCGAGGTACGCGATGCC GACAAGTACGAGCGCCTGCTGCGCTTCGGCCAGGCGCTGCCGCGGCTGCGCCGGCACATCGACGCCCAGTTGCGCCTGCCCGGCCTCGGTCGCGACAAGG TGGTGGCCCTGGCGGTTGCGCTGCTCGACGCCACCCTGATCCGCGTCGGCAACCACCGCTACGCCCGCGACAACCGCTCCTACGGCCTGACCACCCTGCG TACCCGGCACGTCGACGTGAACGGCAGTCGCATCCGGTTCCGCTTCAAGGGCAAGAGCGGCATCGAGCACGACGTCAGCCTGGAGCATCCGCGCCTGGCG CGGGTGCTGCGGCGCTGCCTGGAATTGCCCGGCCAGGACCTGTTGCAGTACCTGGACGAGGACGGCCAGCCGCACCGCATCGGCTCCCACGACATCAACG AGTACCTGCGCCGGCATACCGGCGAGGATTTCAGCGCCAAGGACTACCGTACCTGGGCCGGCAGCGCGCTGGCGCTGGAGCGCCTGCGGCGTGCCGAAGC CGACGGGCTTGGCGCGGTGGTGGCGGAGGTCGCCGCCGAATTGGGCAACAGCGTGGCGATCTGCCGGCAATGCTACATCCACCCGGCGATCATCGAGGCC TACCAGGCCGGGCAACTGGGCCAGCTCAGGCGCGCCCGCAAGCGCCGCTGGCTGAGCGCCGAGGAAGCGACCCTGCTGGCCTTCCTCGACACGCCCGGCT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCAGTTGCCCGGGTGCGGATCGATGCCGTGCCGGCGCAGCAGGCCGAGCAGGCGGCCAATCTCGGTCTGGCAGGCTTCCAGTTCCTTGCGCAGGGTGTGT TCGCGGCGCTGCTGCTCCAGCTTCATGCGTTCGAGTTCGGCGCGCGCCTCGCGGCGGATCTGCCGCTCGCGCTCCTTGTCGGAATGCTCGGCGCCGAGGG CCTCCTCGGCCTTGCGCGCGCGGTACTCACGCATCCGCTGGGCGGCCGACTTGGCCTTGCCGCTCGGCTTGGGGCCGGGTTTGCTGGCTTTCATGAACGC CTCCATCTGCGTAACGTTACGCAATCAGAATAGCGTAACGTTACGCAGATAAACAGGGTCTATGCTTAGAGCGGCGGGGCCGAGCGCAGCATCACCGACT TCAGCGCGAAGGCCGACTTGATGCCAGCCACGCCGGGAATGCAGGTCAGGGTATTGGTGAGGAACGCCTGGTAGGCGGCGAGATCCTTGACCACAACCCG
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Amino Acid Sequence |
>hypothetical protein
MSAAPPEIPALPAGLCYVDDRQPGIRRRRQGKRFVYFDANGQRIGDAEEIRRLDKLAIPPAYREVWICPDPNGHLQATGRDARGRKQYRYHPRWREVRDA DKYERLLRFGQALPRLRRHIDAQLRLPGLGRDKVVALAVALLDATLIRVGNHRYARDNRSYGLTTLRTRHVDVNGSRIRFRFKGKSGIEHDVSLEHPRLA RVLRRCLELPGQDLLQYLDEDGQPHRIGSHDINEYLRRHTGEDFSAKDYRTWAGSALALERLRRAEADGLGAVVAEVAAELGNSVAICRQCYIHPAIIEA YQAGQLGQLRRARKRRWLSAEEATLLAFLDTPG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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