Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_7_a1, TC72_RS14925 (relA)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGGGCTGGGCAATTTCTCCCTGCCGCTGGCGCGTCGGGTGGCGCGGGTAGTCGGGGTGGAGGGCGTGGCGGCGATGGTCGAGCGGGCAGGCGCCAACGC ACTGGCCAATGGCCTTGGCAACGCGCACTTTTTCCAGGCCGACCTGTCCAAAGCGCTTGCCGAAGCGCCCTGGGCGGAGCAAGGTTTTACCGCTGTGCTG CTCGATCCGCCGCGCGACGGCGCGTTCGAGGCGGTACGCGAAATGAGTTCTCTGGGTGCCCGGAGGGTAGTCTATGTATCCTGCAATCCGGCGACCCTGG CGCGCGATGCTGGCGAAATGGCCAGGCAGGGCTATCGTCTGAAGCGCGCCGGAATCCTCGATATGTTTCCGCAGACCGCACATGTCGAGGCCATGGCTTT GTTCGAGGCAGGCTAGGATGCCTGCGTAATCCGACCAGCCCGTTCGAAGGCTGGCGCAGTCATCGGTGGGCTACGCGCACCGTGGTAAAGGGTAGGCAAG
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| DNA Sequence for Gene |
>TC72_RS14925
|relA
ATGGTACAGGTGAGAGCGCACCAGCCGGTCAACACCGACGGCAGTATCAACCTCGAGGCCTGGCTGGACCACGTCCAGAACCTCGTCCCCGGGCTCGATC GTCAGGGCTTGCTGGAGGCTTGCGAGTTCGCTCGCGAATCCGAGCAGCGAGCGATCGCCGCACAGAACTCCTGGGCGGAAGGCACGTCCAGCTTCCAGAC CGGACTGGAAATCGCCGAGATCCTCGCGGACCTCAAGCTGGATCAGGAGTCCCTGGTCGCAGCGGTCATCTATCGAGGCGTGCGGGAAGGCAAGATCACC CTGGAAGCGGTCAACAAGCATTTCGGGCCGGTGGTGGCCAAGCTGATCGAGGGCGTGCTGCGCATGGCCGCAATCAGCGCCAGCCTCAATCCGCGCCATT CCATGGTGCTGGGTACCCAGGCGCAGGTGGAGAACCTGCGCAAGATGCTGGTGGCGATGGTCGACGACGTTCGCGTCGCCCTGATCAAGCTGGCCGAGCG CACCTGCGCCATTCGCGCGGTGAAGAACGCCGACGAGGAAAAGCGCCACCGCGTCGCCCGGGAAGTCTTCGATATCTACGCGCCGCTGGCCCACCGCCTG GGCATCGGGCATATCAAGTGGGAGCTGGAGGACCTGTCCTTCCGTTACCTCGAGCCCGACCAGTACAAGCAGATCGCCAAGCTGCTGCACGAGCGCCGGC TGGATCGCGAGCAGTACATCGCCAACGTGATGAGCCAGTTGAAGGAAGCTCTCGCGGCCACCGGCGTACAGGCCGATCTCAGCGGACGGGCGAAACACAT CTATTCGATCTGGCGCAAGATGCAGCGCAAGGGCCTGGACTTCAGCCAGATCTACGACGTGCGCGCCGTGCGCGTGCTCGTTCCGGAGATGCGCGACTGC TACACCGCGCTGGGCATCGTGCATACCCTCTGGCGGCACATTCCCAAGGAATTCGACGACTACATCGCCAACCCCAAGGAAAACGGCTATCGCTCGCTGC ATACCGCAGTGATCGGCCCCGAGGGGAAGGTGCTGGAAGTACAGATCCGTACCCACTCCATGCACGAAGAGGCGGAGCTCGGAGTCTGCGCGCACTGGCG CTACAAGGGGACCGACGTCAAGGCCAGCTCCAACCATTACGAGGAAAAGATCTCCTGGCTGCGCCAGGTGCTCGAATGGCACGAGGAACTGGGCGACATC GGTGGCCTGGCGGAGCAACTGCGGGTCGATATCGAGCCGGACAGGGTCTACGTCTTCACTCCCGACGGCCATGCCATCGACCTGCCCAAGGGCGCGACCC CGCTGGATTTCGCCTATCGGGTCCACACTGAAGTCGGGCACAACTGCCGCGGGGCGAAGATCAACGGACGCATCGTGCCGCTGAACTACAGCCTGCAGAC CGGCGAGCAGGTCGAGATCATCACCGGCAAGCACAGCGGTCCGAGCCGCGACTGGCTGAACAGCAACCTGGGCTACGTCACCACCTCCCGGGCGCGGGCG AAGATCGTCCACTGGTTCAAGCTGCAGGCGCGGGACCAGAACGTCGCTGCCGGCAAGGCCCTGATCGAACGCGAGCTGTCGCGCCTGGCGCTGCCGCCGG TGGATTTCGACCGGCTGGCGGAGAAGGCCAACGTGCGTACCGCCGAGGATATGTTCGCCGCTCTCGGCGCCGGCGACCTGCGCTTGGCGCACCTGGTCAA CTATGCCCAGCAACTGGTAGAGCCGGACCGCGACAGCGAGCAACTCGAACTGATCCCGCGCAAGCCGAGCAAGATCGGCCACGGCAAGCGCGGCGACGTG CAGATCCAGGGTGTCGGCAATCTCCTGACGCAGATGGCCGGCTGCTGCCAGCCGCTGCCGGGAGATCCCATCGTCGGCTACATCACGCTGGGCCGTGGGG TCACCATCCACCGCCAGGATTGCGCCACCGCGCTGCAACTGGCGGGACGCGAACCGGAGCGGATGATCCAGGTCAGCTGGGGGCCGGAGCCGGTTCGCAC CTATCCGGTGGATATCGCGATCCGTGCCTATGATCGTTCCGGCCTGTTGCGCGACGTGTCCCAGGTGCTGCTCAACGAGCGGATCAACGTTCTGGCGGTG AATACCCGTTCGAACAAGGAAGACAACACCGCGACCATGCAACTGACCATCGAGATTCCCGGTCTGGACGCTCTTGGACGCCTGCTGGCGCGCGTCTCGC AACTGCCCAACATCATCGAGGCGCGGCGCAACCGTACGCCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGCGAGGTGGAAACAGGCCACGGGCGCTCGCAGGCTGCCCGTGGCCTTTTCGTTTCCGGAAAGGGCAGAATGCCCGGACCGTTCACTGAAGACCCGAGAT ACCCATGTACCGACTCGACGACCTGCTCCACCTCATGGCGCGCCTGCGCGATCCCGAATTCGGCTGCCCCTGGGATCTCCAGCAGAGCTACGCGACCATC GTCCCGCACACCCTGGAAGAAGCCTACGAAGTAGCGGACGCCATAGAGCAGGGGGATTTCCCGCAATTGCGCGAGGAACTGGGCGACCTGCTGTTCCAGG TGGTCTATTACAGCCAGTTGGCTCGCGAAGAGGATCGCTTCGCTTTCGACGAGGTGGTGGACGGCATCACCCGCAAGCTGATCCGTCGACATCCCCACGT ATTCCTCGATGGCGATCTCTATGGCAAGCCCGATGCGGCGAAGCTGGCCGAAGCGGCGGTCAAGCAGCGCTGGGAAGAACTGAAGGCCGAGGAGCGTGCC
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| Amino Acid Sequence |
>GTP pyrophosphokinase
MVQVRAHQPVNTDGSINLEAWLDHVQNLVPGLDRQGLLEACEFARESEQRAIAAQNSWAEGTSSFQTGLEIAEILADLKLDQESLVAAVIYRGVREGKIT LEAVNKHFGPVVAKLIEGVLRMAAISASLNPRHSMVLGTQAQVENLRKMLVAMVDDVRVALIKLAERTCAIRAVKNADEEKRHRVAREVFDIYAPLAHRL GIGHIKWELEDLSFRYLEPDQYKQIAKLLHERRLDREQYIANVMSQLKEALAATGVQADLSGRAKHIYSIWRKMQRKGLDFSQIYDVRAVRVLVPEMRDC YTALGIVHTLWRHIPKEFDDYIANPKENGYRSLHTAVIGPEGKVLEVQIRTHSMHEEAELGVCAHWRYKGTDVKASSNHYEEKISWLRQVLEWHEELGDI GGLAEQLRVDIEPDRVYVFTPDGHAIDLPKGATPLDFAYRVHTEVGHNCRGAKINGRIVPLNYSLQTGEQVEIITGKHSGPSRDWLNSNLGYVTTSRARA KIVHWFKLQARDQNVAAGKALIERELSRLALPPVDFDRLAEKANVRTAEDMFAALGAGDLRLAHLVNYAQQLVEPDRDSEQLELIPRKPSKIGHGKRGDV QIQGVGNLLTQMAGCCQPLPGDPIVGYITLGRGVTIHRQDCATALQLAGREPERMIQVSWGPEPVRTYPVDIAIRAYDRSGLLRDVSQVLLNERINVLAV NTRSNKEDNTATMQLTIEIPGLDALGRLLARVSQLPNIIEARRNRTP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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