Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_4_a1, TC72_RS28545
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCCATGAGGCAGACGCCCTGAAACGCCTGTAGCGAGTTTTTCGGCAAGGAATGCCGCATGACCCCGCACGATTCTGCGAAGGCATGCCCGCGACAGACGA GCCCTTCCGGCCCATGTCTCCAAAAGAGCGTGGATCGAAGGTATTTCACTACTTCACGAGAGTGTGGCGAGCAATGAAGAGTTTTGCGTCGGTAAGTGCG CCATTAGCGCTTGAAACAGCCCCCCGCAGACGCGACCGCAGCGGATACCTCATGACCAGAGCCTGACGGCCCGTTCCGTCGCGAATGTGCTTGCACGACC GGATGCCCGCATGGGCCAGCCAGGCTGCCAGATCGCCAGCCCCGCGCCCGGCATCCATAGGCGATGACGCCCGGCGTCCCGCCGTTGTTGCGAAGAATCG GACATGACGGCTCCCTCCGCCGCTGCCTGCCGGCCCGTACCGGCCTCGGCCCCGCCCCGTCTGTCGTCAATTTGGTGCTGAAGATTTTGGAGAAGCGTTA
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| DNA Sequence for Gene |
>TC72_RS28545
ATGGCGCAAAACGATCACGAAACAGTCGACATGCTGCTGGTAGGCGCCGGCATCATGAGCGCGACCCTGGCGGTCCTGCTCAAGGAACTCGACCCCAACC TGAAGATGGAAGTCGTCGAACTCCAGGAGTCCGGCGCGATCGAAAGCTCCAACCCGTGGAACAACGCGGGCACCGGCCACGCCGGCCTGTGCGAGCTGAA CTACACCCCGCAGTCGGCCGACGGCAGCATCGACATCAAGAAAGCCGTGGGCATCAACACCATGTTCGAGGTGTCGAAGCAGTTCTGGTCGCACCTGGTC GCCAAGGGCACCTTCGGCTCGCCGAAGACCTTCATCAACCCGGTACCGCACCTGAGCTTCGTGCGCGGCAGTGAAGGCATCGCCTACCTGAAGAAGCGCT TCGAATCGCTGACGAAGCACCACGCTTTCGAGACCATGGTCTACTCCGAGGACAAGGCCACCCTCGCCGAGTGGATGCCGCTGATGATGCCGGGTCGTCC GGCCGACGAAGCGATCGCCGCGACCCGCGTCGAGGGCGGTACCGACGTCAACTTCGGCGCCCTGACCAACCAGCTCCTGCAACACCTGGCGCAACAGCCG GGCGCGCAGATCCGCTACAACCAGAAGGTCACCCACCTGCGCCGCGCCGATAACGGCTGGCGGGTCACCGTCAAGGACACCCGCAACGGCGGCGACCGCG AGATCCAGGCACGCTTCGTCTTCCTCGGCGCCGGCGGCGGCGCCCTGCCGCTCCTGCAACTTTCCGGCATCCCGGAAGGCAAGGGCTTCGGTGGTTTCCC GGTGAGCGGCCAGTGGCTGCGCTGCGACAACCCGGAAATCGTCAAGCAGCACCAGGCCAAGGTCTACAGCCAGGCCGAGGTCGGCTCGCCGCCGATGTCC GTGCCGCACCTGGACACCCGCGTGGTGGACGGCAAGAAATCCCTGCTGTTCGGCCCCTATGCCGGTTTCTCCACCAAGTTCCTGCGCCATGGCTCGTTCC TCGACCTGCCGCTGTCGGTACGCCCGGGCAACATCCTGCCGATGCTCTCGGTGGCCCGCGACAACATGGACCTGACCCGCTACCTGATCGGCCAGGTCAT GCAGTCGCCGGAACAGCGCCTGGAAGCCCTGCGCAAGTTCTACCCCGAAGCCAGGGCCGAGGACTGGCGCCTGGAAGTCGCCGGCCAGCGCGTGCAGATC ATCAAGAAGGATCCGAAGAAAGGCGGCATCCTGCAGTTCGGCACCGAGCTGGTGGCCGCCCACGACGGCTCCATCGCCGCCCTGCTGGGCGCCTCGCCGG GCGCCTCGGTGACCGTCTCGATCATGCTCGGCCTGATCGAGCGCTGCTTCCCGGAGCAGGCCCGCTCGCCGGAGTGGAGCGCCAAGCTGAAGGAAATCTT CCCGGCTCGCGAGAAAGAGCTGGAAAGCGACGCCGAGCTGTACCGCAGCGTCAGCAGCCGTTGCAGCGAGGTGCTGGAACTGACCGCGAAGAACGACGTG CAGGCCCCGGTCAACGCCGAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGCGCTACGGAACAAGCCGCCTTCGGGCGGCTTTTTCATTTGTGGAGTCAGGCGCCGGCCTCAATTGATCATCCAGGACACCCCGAAACGGTCCACCA GGGTACCGAAACAGGGCGACCAGAAGGTCTTGCCCAACTCCAGCTCGACCCGCCCGCCGTCCTCCAGCAAGGCGTCATAGCAGCGCCGCGCCTGCTGCGG GTCGCGGGTATTCAGTGAAAGGGAAATCCCGGAGATCGGCTGCAACGCCGGCCCGTGCCCGTCCGAGGCCATGATCTGGCTGTCGCCGATCTGCAGGTTG GCGTGCATCACCTTGTCGCACCAGCCTTCGGGCACCACCACCGGACCGGGCGCCTCGTCGAAACGGAACAGGAAACTCACCCTGGCACCGATGGCGTGTT CATAGAAACGCAGGGCCTCTTCGCAACGGCCGTTGAAGCAGACGTAGGGCTGGACGTACATGGGGAACCTCGGCAGGCTGTTTTTCCTGTGAGTGTAGAA
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| Amino Acid Sequence |
>malate:quinone oxidoreductase
MAQNDHETVDMLLVGAGIMSATLAVLLKELDPNLKMEVVELQESGAIESSNPWNNAGTGHAGLCELNYTPQSADGSIDIKKAVGINTMFEVSKQFWSHLV AKGTFGSPKTFINPVPHLSFVRGSEGIAYLKKRFESLTKHHAFETMVYSEDKATLAEWMPLMMPGRPADEAIAATRVEGGTDVNFGALTNQLLQHLAQQP GAQIRYNQKVTHLRRADNGWRVTVKDTRNGGDREIQARFVFLGAGGGALPLLQLSGIPEGKGFGGFPVSGQWLRCDNPEIVKQHQAKVYSQAEVGSPPMS VPHLDTRVVDGKKSLLFGPYAGFSTKFLRHGSFLDLPLSVRPGNILPMLSVARDNMDLTRYLIGQVMQSPEQRLEALRKFYPEARAEDWRLEVAGQRVQI IKKDPKKGGILQFGTELVAAHDGSIAALLGASPGASVTVSIMLGLIERCFPEQARSPEWSAKLKEIFPAREKELESDAELYRSVSSRCSEVLELTAKNDV QAPVNAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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