Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_30_a1, TC72_RS08015

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.25.40.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Coils Coil Coil - - 904 919 -
NCBIfam TIGR03504 JCVI: FimV/HubP C-terminal domain IPR020011 Motility protein FimV, C-terminal 875 918 6.6E-21
MobiDBLite mobidb-lite consensus disorder prediction - - 144 177 -
Gene3D G3DSA:1.20.58.2200 - IPR038440 FimV, C-terminal domain superfamily 858 919 1.9E-27
MobiDBLite mobidb-lite consensus disorder prediction - - 380 394 -
NCBIfam TIGR03505 JCVI: FimV/HubP N-terminal domain IPR020012 Motility protein FimV, N-terminal 182 254 4.0E-30
Coils Coil Coil - - 486 506 -
Coils Coil Coil - - 319 367 -
SUPERFAMILY SSF48452 TPR-like IPR011990 Tetratricopeptide-like helical domain superfamily 527 607 4.98E-5
MobiDBLite mobidb-lite consensus disorder prediction - - 788 816 -
Gene3D G3DSA:3.10.350.10 LysM domain IPR036779 LysM domain superfamily 163 238 7.2E-10
Gene3D G3DSA:1.25.40.10 Tetratricopeptide repeat domain IPR011990 Tetratricopeptide-like helical domain superfamily 547 626 3.9E-6
MobiDBLite mobidb-lite consensus disorder prediction - - 372 445 -
CDD cd00118 LysM IPR018392 LysM domain 175 229 3.23679E-6
SMART SM00257 LysM_2 IPR018392 LysM domain 175 230 0.0037
MobiDBLite mobidb-lite consensus disorder prediction - - 237 259 -
MobiDBLite mobidb-lite consensus disorder prediction - - 411 445 -
MobiDBLite mobidb-lite consensus disorder prediction - - 237 313 -
MobiDBLite mobidb-lite consensus disorder prediction - - 269 283 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.