Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_15_a1, TC72_RS03010

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAAGAAAACACAGAAGAATGATTCACCGAGTCGATATAGGGCGAACATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACG ATTCGTCGCACCGCCGAAACACTGCTGAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATC CGAACATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAGTCCACCCCGGTGAT CATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTACCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTG GGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCGTTTCCTGATATCCGGCCGCATGGCCGTTGATGCTTATTTCGTGATGGGGATCCC
DNA Sequence for Gene
>TC72_RS03010
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCAGGTACTCAAGGCCGAGAACG GCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCGTCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATT GACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATCGTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGAC TACCTGACCAAGCCGGTGGACGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCGTCGCAGCGCATCGCTCACCCTGACCCCGGAAAGACCAGGCCCCGCATGTCGGACGTTCAGACCCCCTTCCAGCTCCTCGTCGACATCGATCAGCG CTGCCGACGCCTGGCCGCTGGCCTGCCGGCCCAGCAGGAGGCGGTGCAGAGCTGGAGCGGGATCGGCTTCCGCATGGGCGGGCGGTTCTTCGTCGCCCCC ATGGGGGAGGTCGGCGAAGTCCTGCACGAACCGCGCTACACCCAGCTGCCGGGCGTGAAGACCTGGGTCAAGGGGGTGGCCAACGTACGTGGCCGCCTGC TGCCGATCATGGACCTCTGCGGTTTCCTCGGCACCGAACTGTCGCCCTTGCGCAAGCAGCGGCGGGTGCTGGTGGTGGAGCACCTGGACGTGTTCGCCGG CCTCATCGTCGATGAGGTGTTCGGCATGCAGCACTTCCCGGTGGACACCTTCAGCGAACAGCTGCCGCCACTAGAAGCGGCACTGCAACCCTTCATTCAT
Amino Acid Sequence
>protein PilH
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVIIVTTKDQETDKVWGKRQGARD YLTKPVDEETLLKTINAVLAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site