Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_5_a1, TC72_RS20395

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGGCAGGGGAAGCAGGAGCAGCAGTACGAGCAGCAGGCGGCGCATGAGAACGATCCGGAGCCGGGTGAAAAGGCGGCTATTATAGGCGCGACCGTTTCC CCTGAGCCGCCGACATGCCCACCGCCAAGCCCGAAATCGTCATCACCTATTGCACCCAGTGCCAGTGGCTGCTGCGTGCCGCCTGGCTGGCCCAGGAACT GCTCAGCACCTTCGCCGACGATCTCGGAAAAGTCTGCCTGGAGCCCGGAACCGGCGGCGTATTCCGCATCACCTGCGACGGCGTGCAGGTCTGGGAGCGC AAGGCCGACGGCGGCTTCCCCGAGGCCAAGGCGCTCAAGCAGCGGGTTCGCGACCGCATCGACCCGCAACGCGACCTCGGTCACAACGATCGTCCTTCCC GCTGAACCGCTGCCGTCCGCCCATGGCTTGTTGCAGGTCAACGGGCGGCACGGCGCATAGGCATAGCCTGGGGGCATTCATCCTGTCGAAGGGAGTGCCC
DNA Sequence for Gene
>TC72_RS20395
ATGAGCATCATCGTCACCGGCGCCGCCGGCTTCATCGGCAGCAATCTGCTGCAGGCGCTGAACCGGCGCGGCGAGACCGACATCATCGCGGTGGACGATC TCACCGACGGCGAGCAGTTCCGCAACCTGGCGGACGCCGATATCGCCGACTACCTGGACCAGAACGACTTCCTCGAGCGTTACGCCCGCGGCGACTTCGG CACGGTCCGCGCGCTGTTCCACCAGGGTGCCTGCGCCAGCACCCTGGAAAGCAATGGCCGCTACATGATGGAGAACAACTACCGCTACAGTTGCCGCCTG CTGGAAAGCAGCCTGGAACTCGGCGTGCCGTTCCTCTACGCCTCGTCGGCGGCGGTCTACGGATCCGGCCGGACCTTCCGCGAGGCGCGCCAGTACGAGC GGCCGCTGAACGTCTACGGCTATTCCAAGTTCCTCTTCGACCAGCGTGTGCGGCGGGCGCTGCCGCAGGCGCGCAGCCAGGTGGTCGGCCTGCGTTACTT CAACGTCTACGGGCCGCGCGAGGAACACAAGGGGCGGATGGCCTCGGTGGCCTACCACTGCTACCAGCAATTGCGCCGCGATGGGCGGGTCGAACTGTTC GGCGAACACGGCGGCTTCCCGCCCGGCGGCCACCTGCGCGACTTCGTCGCGGTGGAGGACGTGGCGCGGGTAAACCTGCATTTCTTCGACCATCCGCAGC GTTCGGGAATCTTCAACCTCGGCAGCGGCCAGGCACGGACCTTCAACGAGGTCGCCCTGGCGGTGATCAATAGCGTCCGCGCCAACGCCGACCAGCCGCC CCTGTCGCTGCAACAGGCCGTGGAAAGCGGCCTGCTCGGCTACCGCGAGTTCCCCGAGTCGCTGCGGGCGCGCTACCAGAGCCATACCTGCGCCGACCTG GAGCTGCTGCGCGAGGCGGGCTACCGCGACGATTTCCAGAGCCTGGAAGAGGGCGTCGCCGGCTACTGCCGCTGGCTGGCGCGCAGCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGGATCCTGCTCAGCGGCCCAGCGCCCCGCCTACCGGGGCGCGGGCGAAGCGCAGCTCCGGCAGCAGGGTCAGCAGCGCCAGTACTCCGAGGGCCGCGCC GACCCAGAGCGCGCCCTGCAGGCCGAATCCGCCGGCGATGCCCAGGCCGCCGATCCAGGAACCGGCCATTACGCCGAGCATGATGCAGGCAGTGTGCACC GAGTTGACCAGCATGTTGTTATGGCCGACCCGTGCGCCGCGGGTCACCAGCGCCGGGTTCATCGACACCCCGGTCAGGCCGATCACCACCAGCGCCGCCA CCGCCACCGCCGGAACCTGTCCGAACAGGGCGAAGGCCACCATCGCGGCGATGGCCGCCAGCAGGCCGAAGGCCAGGACCGCGATGGTATGGTGGTCGGC CAGGCGGCCGACGATGTTGTTGCCCACCAGCGTCGCCAGGCCGTAGACCACCAGCAGCAGCGGTACGGTCGAGGCGGAGAAGCCGCTGACCTCGGTGAGG
Amino Acid Sequence
>ADP-L-glycero-D-manno-heptose-6-epimerase
MSIIVTGAAGFIGSNLLQALNRRGETDIIAVDDLTDGEQFRNLADADIADYLDQNDFLERYARGDFGTVRALFHQGACASTLESNGRYMMENNYRYSCRL LESSLELGVPFLYASSAAVYGSGRTFREARQYERPLNVYGYSKFLFDQRVRRALPQARSQVVGLRYFNVYGPREEHKGRMASVAYHCYQQLRRDGRVELF GEHGGFPPGGHLRDFVAVEDVARVNLHFFDHPQRSGIFNLGSGQARTFNEVALAVINSVRANADQPPLSLQQAVESGLLGYREFPESLRARYQSHTCADL ELLREAGYRDDFQSLEEGVAGYCRWLARSA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site