Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_1_a1, TC72_RS19965

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AACGCTGCCGCGCGCTCCCCTGCGCCGGCCGCGGCAACCTCAGCCAGTTGCCCGGCGGCCTGCTGGTGGCGCGCTGCCTGGCCGACGAGGCGCTGCACGC GCGAGCCTGGCTGATCGAACTCTGGCGCCTGCTGCGGCCGGCGCTGCTCGGCCGCGAGGCCGTTCCCCCACGCATCTGGAGTACCTGAGATGGACTTGTC CCCCCGCGAGAAAGACAAGCTGCTGATCTTCACCGCCGGCCTGCTCGCCGAGCGCCGGCTGGCACGCGGTCTCAAGCTGAACTACCCGGAGGCGGTGGCG CTGATCTCCGCCGCCCTGCTGGAGGGCGCGCGCGACGGCCGCAGCGTCGCCGAGCTGATGCACTACGGCACCACCCTGCTGAACCGCGGGCAGGTGATGG AGGGCGTGCCGGAGATGATCCCGGACATCCAGGTGGAGGCCACCTTCCCCGACGGCACCAAGCTGGTGACCGTCCACCAGCCCATCGCCTGAGGCCGGCC
DNA Sequence for Gene
>TC72_RS19965
ATGAGCGCTTCGATCCGCGACGCCGGCGTCGCCGACCTGCCCGGCATCCTCGCCATCTACAACGACGCCGTGGGCAATACCACGGCGATCTGGAACGAAA CCCCGGTGGACCTGGCCAACCGCCAGGCCTGGTTCGACACCCGCGCCCGCCAGGGCTACCCGATCCTGGTGGCGAGCGACGCCGCCGGCGAAGTGCTCGG CTACGCCTCCTACGGCGACTGGCGGCCCTTCGAGGGCTTCCGCGGCACCGTCGAGCACTCCGTCTACGTGCGCGACGACCAGCGCGGCAAAGGCCTCGGC GTGCAACTGCTGCAGGCGCTGATCGAACGTGCGCGGGCCCAGGGCCTGCACGTCATGGTGGCCGCCATCGAAAGCGGCAATGCCGCCTCGATCGGCCTGC ACCGGCGCCTCGGCTTCGAGATCAGCGGGCAGATGCCGCAGGTGGGCCAGAAGTTCGGCCGCTGGCTCGACCTGACCTTCATGCAACTGAACCTCGACCC GACGCGCAGCGCGCCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCCCAAGGAGCCCCCATGATCCCCGGTGAATACGACATCCAGCCCGGCGATATCGAACTCAACGCCGGCCGCCGCACCCTCGCCCTGAGCGTGGCGAAC ACCGGCGACCGGCCGATCCAGGTCGGCTCGCACTACCACTTCTTCGAGGTCAACGACGCCCTCGCCTTCGACCGTCCGGCCACCCGTGGCATGCGCCTGA ACATCGCCGCCGGCACCGCGGTGCGCTTCGAACCGGGGCAGAGCCGCGAGGTGGAGCTGGTGGAAATCGGCGGCGGACGGCGGGTATACGGCTTTGCCGG GCGGGTGATGGGGGACCTCTAGGGCCCCACTGGCCAGGTTCGACCAAAGACAGCGAACACCGACGATCGCCAAAGGAGCGTTCGATGAAAATCAGCAGAC AAGCCTACGCCGACATGTTCGGCCCCACCGTCGGCGACCGCGTGCGCCTGGCCGACACCGACCTGTGGATCGAGGTGGAACGGGACTTCACCGTCTATGG
Amino Acid Sequence
>hypothetical protein
MSASIRDAGVADLPGILAIYNDAVGNTTAIWNETPVDLANRQAWFDTRARQGYPILVASDAAGEVLGYASYGDWRPFEGFRGTVEHSVYVRDDQRGKGLG VQLLQALIERARAQGLHVMVAAIESGNAASIGLHRRLGFEISGQMPQVGQKFGRWLDLTFMQLNLDPTRSAP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site