Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_32_a1, TC72_RS23175

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGGCGCCCGAAAGGCGGCCCCGGCCAGCCTTGATCAGATCAAGCTGGCCGGGGCCGTCTTTGTCCACTTCGTTGCCGGTCGTACCGAAATCCAGGGGAAC GGTGATCTTGCTGTCGAAGGAGAGGATGCGGTCCTGCAATTCCTCTGCATGCTTCATGACTTTGCGTGGGTAGCTGGCGCTGCTCGGCCCGAAAGCTTTC CAGGCCAGCAGGCCTGCGCCGACGAGAGTAATGAAGAGGATCGGTAAGCCTAAGTAGAGGGCCTTGCTTGTACGTGGTCTGGTCATTGCCATCTCAGTCA GGGTCGAGATCGAGGAGCGCCGGCGGTTGCCTGTCGAAGCGGGCCCACCTGTCAGGGAGGAACGAGGCGGGAGAGGGAAAATTTAGCCATGGTCCCTCTC GACCATGGTGTCGAGGCTTGGTGGCGTGCCAGTAAATTTGCCGACGGACGGAACGTTCTAGCTGGATAAAGCGGGCTTCGCGGTTGACACAGGTAGGACG
DNA Sequence for Gene
>TC72_RS23175
ATGACGGTTTCTCGACGAGGTTTCATGGCCGGCTTGGCGCTGACCGGAGCGGCGGCGTTGCCGGTGGCTTACTACAGCCGCCGTCACTTGGCCCGCGAAG AAGAGGAACCGCCCACGGCCGACGAGGCCGTGCTCGATCTGGCCGATACCGCGGGTATGCGCCTGGGTGGTCGCTTGCGTGGGGTGTGGGACCTGCGTCT GGTCGGTGCTGATGCTGGCTTGCCCGGCCTGCCGGCGGAAGGCTTGCAAATGGTGCTGGATGTCGCTCCCAAGGGGCGTGGCCTGATTGGCTATCTCGAT ACTCCTACACGACTGCTGTCGAGCGATGAGCCCAGGTTCCGTGTGAGCGGCGACCTCGTTGGAGCCAGTTCGGCGCGAATTCGCTGGCGCCTGGTCGACC AGGCTTCGGCGTCGATGGCGCCGACCCATGACTGCTCCGCAGTATTTGATGAAGTCTGGGATAATTTCGCCAATGCCGGGGACGGCACGCTGAGCGGGCA TATCTTGCGCCTGGATCGTTCTCCGGGGCTGCCGGAGGAAGATTTCCGCTTCGTAGCGGTCAAGCGACACTTTCCGCCAGCTCGCGAACGCATCGCTCTC AACGAGAAATTGCTGGGATGGTTAGTGTCGCCGCAGCACCGGTTGTTCCACCAGCTATGGCACGCCTCGCGGGACAAGTGGCATCAACTGTCGGAGAAGC AGCGCAATGCGTTGCGTGGGGTGGGCTGGCAGCCTGGCCCGCTGGACCGGGAGCGCGATGCGCGGGGGCCAAGAAAGGATCGCAACGCTTCTGGTATCGA CTTCCTTTTCATGCATCGGCATATGCTGCATACCGCACGATCCATGCAAGACCTGCCATCCTGGAAGCGTTTGCCGCGCCCCGCGGTTCCGCTGGAATTC GATCGTCCCGGCTTCATCCGCTACTTCGACAATCCAGATGGTTTCTCCGTGCCGCCGGCCTGGGTAGCGGTCGGGGACGACGAATACAGCGAATGGCTGC GTGGGTTGAAAAGCGCAGAAGCGTACCATTCCAATTTCCTGGCCTGGGAGTCGCAGTACCAGGATCCGGAATATCTGGCGAAGTTGACCCTGGGACAGTT CGGCTCGGAGATGGAGCTGGGTATGCACGATTGGTTGCATATGCGCTGGGCGACCGTGACCCGCGACCCATCCAACGGGTCGCCGGTCATGGGCGACCGC GTCCCGTCGGATTTCTCGCCGCGCTGGTTCCGCCCGGAGAACGATTTCCTCGGCGATCCGTTCTCGTCCCATGTGAATCCCGTGTTCTGGTCCTTCCATG GCTGGATCGACGACCGTATCGAGGATTGGTACCGTGCCCACGAGCGTTTCCATCCCGGCGAAGTTCGGCGTCGAGAGGTGCAGGGTATTCCCTGGTTTGC GGCTGGGCGCTGGGTGGAGGTGGACGACCCTTGGCTCGGCCCGGCGACCCATGGTTGCGGCCTGTCGGATCTGCAGGCGAGCAGCAATTCGGTGGAGCTG GACGTGGAAACCATGAAGCTGGCGGTACGCATCATCTTCAGCGAAGAAGACCAGTTGAGCGGCTGGCTCAAGCGTGCGCCGCGGCGGCCCTGGTACGCGC GCAACCTGAAGCTGGCGCGCGACCAGCTCAGGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGGCGAAAGAGCGAGTAAGGATGGAGGAGGCCCGCGCAACGCGGGCCTCAGTCTTTCCGCGCGAGACCCTGGCGGTCGCTCTGCCAGCCGCCGCCGAGG GCCTTGTACAGGCCGACCGAGGCCTGCAGGCGGGCCAGTCGCAGTTGCACGGCGGCATCCTGCGCCGCGTACAGCGTGCGTTGCGTTTCGAGGACCGTCA GCAGGGTTTCCGCGCCGGCCTGGTAGCGGCTGTCGGAGAGATCGAAGGCGCGCTGCGCCTGCTCCAGCTCCTGCTGCTGCCAGTGCAACTGGCGGTCGAG GCCGTCGATGCTGTTCAGCGAGCGTTCGGTGTCGGCAAAGGCGGTGAGGATCGCCTTGCGGTAGGTTTCCAGCAGTTCTTCCTGGCGCGCCAGGCTGCGG TCGCGCTCGGCGCGCAGGCGGCCGTGGTTGAAGATCGGGGCGAGCAGGTTGGCGCCCAGGTTGTAATAGGGGTTGCGGAAAGTGTCGGCGGCGCGGTTGG
Amino Acid Sequence
>chromophore maturation protein PvdP
MTVSRRGFMAGLALTGAAALPVAYYSRRHLAREEEEPPTADEAVLDLADTAGMRLGGRLRGVWDLRLVGADAGLPGLPAEGLQMVLDVAPKGRGLIGYLD TPTRLLSSDEPRFRVSGDLVGASSARIRWRLVDQASASMAPTHDCSAVFDEVWDNFANAGDGTLSGHILRLDRSPGLPEEDFRFVAVKRHFPPARERIAL NEKLLGWLVSPQHRLFHQLWHASRDKWHQLSEKQRNALRGVGWQPGPLDRERDARGPRKDRNASGIDFLFMHRHMLHTARSMQDLPSWKRLPRPAVPLEF DRPGFIRYFDNPDGFSVPPAWVAVGDDEYSEWLRGLKSAEAYHSNFLAWESQYQDPEYLAKLTLGQFGSEMELGMHDWLHMRWATVTRDPSNGSPVMGDR VPSDFSPRWFRPENDFLGDPFSSHVNPVFWSFHGWIDDRIEDWYRAHERFHPGEVRRREVQGIPWFAAGRWVEVDDPWLGPATHGCGLSDLQASSNSVEL DVETMKLAVRIIFSEEDQLSGWLKRAPRRPWYARNLKLARDQLRR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site