Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_16_a1, TC72_RS21630
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGCCGCATAT-N1-ATATGCGGCG | 134177 | 134197 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TTTTTTTGCC-N72-GGCAAAAAAA | 134200 | 134291 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 15 | 134177 | 134197 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAGGCCGCTG-N4-CAGCGGCCTT | 134523 | 134546 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 16 | 134525 | 134544 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAGGCCGCTG-N4-CAGCGGCCTT | 134523 | 134546 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 16 | 134525 | 134544 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |