Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_14_a1, TC72_RS30045

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF05860 TPS secretion domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 30 291 2.4E-61
Gene3D G3DSA:2.160.20.10 - IPR012334 Pectin lyase fold 36 320 3.6E-102
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 379 418 1.2E-4
NCBIfam TIGR01901 JCVI: filamentous hemagglutinin family N-terminal domain IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 66 163 2.8E-18
SUPERFAMILY SSF51126 Pectin lyase-like IPR011050 Pectin lyase fold/virulence factor 45 294 4.39E-65
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 311 350 0.13
SMART SM00912 Haemagg_act_2a IPR008638 Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain 47 168 4.7E-46
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 364 379 7.9
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 296 371 6.9
Pfam PF05594 Haemagglutinin repeat IPR008619 Filamentous haemagglutinin repeat 407 460 1.6E-7
NCBIfam TIGR01731 JCVI: filamentous hemagglutinin 20-residue repeat (two copies) IPR010069 Toxin CdiA-like, Filamentous hemagglutinin motif repeats 419 460 1.6E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.