Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_13_a1, TC72_RS02610

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTCCAGTTCGTGCAGCGGTTGGTCGCTTTCCGCTTCCAGTTCGAACCAGCGGGAGGCATCGTTGAAGACCTTCAGCGGGCGCATGCGTCCACGCGCGACG CCGGCCTTCTGGTAGAGGTCCTGCTGTTCCATGTAGAACAGCGACCAGCCGCGGGCCTGGGCAGCCAGCAGCATGGCGAGCGAGCTGTCCTTCTTGAAGT TGATGCGCGCGATGGGGTCCATGACGATCCCGAGGCGTACGCTCATGGGAATTCCTCCGAAAGGGGGTGGGTTGTCCGGTCGCGGCGGGGAGGCCGCGTG GCAAGCGGGTTTGACGCTCAGGTTGGCGCCCCGTTTGCGCTTGGTCAAGGAAAAAGCCGGCCTGTTCCGGGCATTATGGATAGAGTTGCGTCGAGTGTGC TAAAAAGGCCCGCGATTGGGTCGCAGCCCGTCGGTGACAGGGCGTTAGCGCACTGAAGAAAACACAGAAGAATGATTCACCGAGTCGATATAGGGCGAAC
DNA Sequence for Gene
>TC72_RS02610
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCTGAAAAAGGTCGGTTGCGACG TGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTA TCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAGTCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGC ATCGTCGGCTCCGACCAGTACCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG TTTCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TATCCGGCCGCATGGCCGTTGATGCTTATTTCGTGATGGGGATCCCATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACC GCCATGCTGGAAAAGCATGGTCACCAGGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGG ACATCGTCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATCGTCACCACCAAGGA CCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGACGAAGAGACCCTGCTGAAAACCATCAATGCGGTG CTGGCGGGCTGAGCCCGTCGCAGCGCATCGCTCACCCTGACCCCGGAAAGACCAGGCCCCGCATGTCGGACGTTCAGACCCCCTTCCAGCTCCTCGTCGA
Amino Acid Sequence
>protein PilG
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFKSTPVIMLSSKDGLFDKAKGR IVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site