Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_10_a1, TC72_RS07785

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_10_a1
GCF_000823945.1|latest
Locus Tag
TC72_RS07785
Name
Replicon contig_5
Genomic location 25862 - 26881 (- strand)

Cross-References

RefSeq WP_012614097.1
GI 501656388

Product

Feature Type CDS
Coding Frame 1
Product Name
oxidoreductase
Synonyms
Evidence for Translation
Charge (pH 7) -7.98
Kyte-Doolittle Hydrophobicity Value 0.063
Molecular Weight (kDa) 36813.1
Isoelectric Point (pI) 5.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
MexS MexS is a suppressor of MexT, which is an activator of the multidrug pump MexEF-OprN. Mutations in MexS lead to multidrug resistance. [PMID:11040437, PMID:15687188, PMID:26833155] ARO:3000813 protein overexpression model Strict 672.9 99.71 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003064 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: TC72_RS07785
Search term: oxidoreductase

Human Homologs

Ensembl 110, assembly GRCh38.p14
vesicle amine transport 1 [Source:HGNC Symbol;Acc:HGNC:16919]
E-value: 3.5e-25
Percent Identity: 27.4

References

No references are associated with this feature.