Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_10_a1, TC72_RS00375

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGTCAAGGTCGCCATGCGCGCCCAGGACAAGCCGCGGCTGACCACGTTGCGCCTGGCCCTCGCGGACATCAAGCGCGTCGAAGTCGACGAACGCATCGAG GTGGATGACGCCCGAGCCCTGCTGATCCTCGACCGGATGATCAAGCAGCGCCGCGACGCCCAGCGCCAGTTCAGCGACGCCGGCCGCCAGGACCTCGCCG AGGTCGAGGCTGCCGAGATCCTCGTGCTCCAGGACTTCATGCCCAAGCCCCTGGACGACCATGAGATCGACGCCCTGATCGAGCGCAGCATCGTCGACAG CGGCGCCCAGGGTCCGCAGGACATGGGCAAGGCGATGAACCTGCTGCGACCGCAGGTCCAGGGTCGCGTCGACATGGCACAGGTCAGCCAGCGCCTGAAG GCGCGCCTCTCCTCCTGAAACACCGCGCCGGCCTGATCGGCCCGGCGATAATTGCTATGCTGCCGCTCTGCGCCCACGCGCCGTCGTTTTCGAGAACACC
DNA Sequence for Gene
>TC72_RS00375
ATGGCCGGCCTGATACCGCAAAGCTTCATCGATGACCTGCTGAACCGCACCGACATCGTCGAGGTGGTGAGTTCACGCATCCAACTGAAGAAAACCGGCA AGAACTACAGCGCCTGCTGCCCGTTCCACAAGGAAAAGACTCCCTCGTTCACCGTCAGCCCGGACAAGCAGTTCTACTACTGCTTCGGCTGCGGCGCCGG CGGCAACGCGCTCGGCTTCGTCATGGACCACGACCAGCTGGAGTTCCCCCAGGCGGTCGAGGAACTGGCCAAGCGCGCCGGCATGGACGTGCCGCGCGAG GAACGCGGCGGACGCGGGCACACGCCGCGCCAGCCGACCGACTCGCCGCTCTACCCGCTGCTCAGCGCCGCCGCCGAGTTCTACAAGCAGGCGCTGAAAA GCCACCCGGCGCGCAAGGCCGCGGTGAACTACCTGAAGGGCCGCGGCCTGACCGGCGAGATCGCCCGCGACTTCGGCCTCGGTTTCGCCCCGCCCGGTTG GGACAACCTGCTCAAGCACCTGGGTGGCGACAACCTGCAACTCAAGGCCATGCTCGACGCCGGCCTGCTGGTGGAGAACAGCGACACCGGCAAGCGCTAC GACCGCTTCCGCGATCGCGTGATGTTCCCGATCCGCGACAGCCGCGGGCGGATCATCGCCTTCGGCGGCCGGGTGCTCGGCGACGACAAGCCGAAGTACC TGAACTCCCCGGAGACTCCGGTCTTCCACAAGGGCCAGGAACTCTACGGACTCTACGAGGCCCGGCAGAAGAATCGCGACCTCGACGAGATCATGGTGGT CGAGGGCTACATGGATGTCATCGCCCTGGCCCAGCAAGGCATCCGCAACGCGGTGGCGACCCTCGGCACGGCGACCAGCGAGGAACACATCAAGCGCCTG TTCCGCCTGGTACCGAGCATCCTGTTCTGTTTCGACGGCGACCAGGCCGGGCGCAAGGCGGCCTGGCGCGCCCTGGAGTCGGTGCTGCCGAACCTGCAGG ACGGCAAGCGCGTGCGCTTCCTGTTCCTCCCCGAGGGCGAGGACCCGGACAGCCTGGTACGCGCCGAGGGCGAGGATGCCTTCCGCGCACGCATCACCCA GCAGGCCCAGCCGCTGGCGGAGTACTTCTTCCAGCAACTGATGCTGGAGGCCGACCCCGCCACCCTGGAAGGCAAGGCCCACCTGGCGACCCTCGCCGCG CCGCTGCTGGAGAAGATTCCCGGGAACAACCTGCGCCTGCTGATGCGGCAACGTCTGTCGGAAATCACCGGCCTGTCCGGCGAAAACATCGGACAACTGG CGCACCACAGCCCGCCACCGTCGTCCATGGATCACGGAGCGAGCGGCGCCTTGGACGGCGACGACTATCTCGCCGCCAGCGCCTACTACGAGAACGAGCT CTCCCATGCGCCGTTCGACGCTGCGCCAGGCTATGGCGAGGCGCAACCGCGCAAGAGCTGGAACAAGGACAAGAAGCCCTGGGACGGCAAGAAGTGGGAT GGCAAGAAGAAGTGGGACAAAGGCGGCCGCGGCGACTTCAAGACGCCGCAACGAACGCCGGTCAGCGTGGAGTCCACCACCCTCAACGCCCTGCGCACCT TGCTGCATCATCCGCAGTTGGCCTTGAAGGTCGACGATGCGGGCACCCTCGCCAGGGAGCAGGATACCTACGCCCAGTTGCTGGTGTCCCTGCTGGAAGC CCTGCAGAAGAACCCGCGGCAGAGCTCAATGCAACTCATCGCGCGCTGGCACGGCACGCCCCAGGGCCGCCTGCTGCAGGCCCTGGGCGAGAAGGAGTGG CTGATCGTCCAGGAGAACCTTGAAAAGCAGTTCTTCGACACCATTACTAAACTCTCCGAGAGCCAGCGTTTCGGCGAGCGGGAGGAGCGTTTACGCAGCG TCATGCAGAAGAGCTACAGTGAACTGACCGATGAAGAGAAAGCCTTGCTCAGAGAGCACTACAGTGTTGCCGCTTCATCGCCTTCCCAGAGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACTGGCGCCTCAGCCCAGGCATCAGGTATAATCCTCTGCTTATTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAG CAATCTCGTCTGAAAGAGTTGATCGCCCGAGGCCGTGAGCAGGGATACCTGACTTACGCGGAGGTCAACGACCACCTGCCGGAGGATATTTCCGATCCGG AACAGGTGGAAGACATCATCCGCATGATCAACGACATGGGGATCAACGTATTCGAGACAGCCCCGGATGCGGATGCCCTGTTGCTGGCCGAGGCGGATAC CGACGAAGCCGCAGCGGAAGAAGCCGCAGCGGCCCTGGCCGCGGTGGAAAGCGACATCGGTCGCACCACCGACCCGGTGCGCATGTACATGCGTGAAATG GGTACCGTGGAACTGCTGACCCGCGAAGGCGAGATCGAAATCGCCAAGCGCATCGAGGAAGGCATCCGCGAAGTGATGAGCGCCATCGCCCAGTTCCCGG
Amino Acid Sequence
>DNA primase
MAGLIPQSFIDDLLNRTDIVEVVSSRIQLKKTGKNYSACCPFHKEKTPSFTVSPDKQFYYCFGCGAGGNALGFVMDHDQLEFPQAVEELAKRAGMDVPRE ERGGRGHTPRQPTDSPLYPLLSAAAEFYKQALKSHPARKAAVNYLKGRGLTGEIARDFGLGFAPPGWDNLLKHLGGDNLQLKAMLDAGLLVENSDTGKRY DRFRDRVMFPIRDSRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLYEARQKNRDLDEIMVVEGYMDVIALAQQGIRNAVATLGTATSEEHIKRL FRLVPSILFCFDGDQAGRKAAWRALESVLPNLQDGKRVRFLFLPEGEDPDSLVRAEGEDAFRARITQQAQPLAEYFFQQLMLEADPATLEGKAHLATLAA PLLEKIPGNNLRLLMRQRLSEITGLSGENIGQLAHHSPPPSSMDHGASGALDGDDYLAASAYYENELSHAPFDAAPGYGEAQPRKSWNKDKKPWDGKKWD GKKKWDKGGRGDFKTPQRTPVSVESTTLNALRTLLHHPQLALKVDDAGTLAREQDTYAQLLVSLLEALQKNPRQSSMQLIARWHGTPQGRLLQALGEKEW LIVQENLEKQFFDTITKLSESQRFGEREERLRSVMQKSYSELTDEEKALLREHYSVAASSPSQS
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site