Strain | Pseudomonas aeruginosa WS136, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGGCTGGTGGCGGTGGAAGGCGCTCCGCGCGCCGTGGCCGAGGGCGACTGGCTCTGGTATAACCTCGCCACCCCGCCGCGCCTGGGCCTCGCCGCTCCG GTGAAGAAGCTGCTCAAGCGCGCAGAACAGGAACTCGGACGCGGCACGACCGCGTGAATGCCGGGCCCGCGGGCCCGGCGGCAACTGCAGGAGAACGACC ATGAGCCGCACCGTGATGTGCCGCAAGTACCACGAAGAGCTGCCCGGCCTCGACCGCCCGCCGTATCCTGGCGCGAAGGGCGAGGACATCTACAACAACG TGTCGCGCAAGGCCTGGGACGAGTGGCAGAAGCACCAGACCATGCTGATCAACGAGCGTCGCCTGAACATGATGAACGCCGAGGACCGCAAGTTCCTCCA GCAGGAGATGGACAAGTTCCTCTCCGGCGAGGACTACGCCAAGGCCGACGGCTACGTGCCGCCATCCGCCTGACCCCCACCCCGCCCGACGGAGGCCGCC
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DNA Sequence for Gene |
>PAWS136_RS28120
ATGACCCCATCCCTCTCTGGCCTGCCTCCGATCCGCACCGCGCTGATCGGCTACGGCTTCGCCGGCAAGACCTTCCACGCCCCGCTGATCCGCGCGGTAC CGGCGTTGTGCCTGGAGCACGTGGTCTCCCGCGACCCTGGGCGGGTGCACGCCGACCTGCCCGAAGCCCGGGTCAGCGCCGATCCGGATGAGGCCATCGA GGCCGCCGACATCGACCTGGTGGTCATCGCCTCGCCCAATGCCACCCACGCCAGCCTCGCCGAACGGGCCTTGCGCGCCGGCAAGCACGTGGTGGTGGAC AAGCCGTTCACCGTCACCCTGGCCGAAGCCCGGCGCCTCGCCGACCTCGCCCGTGAACGGCCTGGGCAGGTCCTCTCGGTGTTCCAGAACCGGCGCTTCG ACAGCGACTTCCTCGCCGTGGAGGCCGCCCTGCAGGCCGGCAGCATCGGCCCGGTGCGCTACTTCGAGTCGGCCATCGAGCGCTTCCGTCCGCAGGTCCG CGACCGCTGGCGCGAACACGACCTGCCCGGCTCCGGGCTGTGGTTCGACCTCGGCCCGCACCTGCTCGACCAGGCACTGTGCCTGTTCGGCGTACCGCAG CGTGTGCACGGACACCTGCGCCGGCTGCGCGAGGGTGCGCAGACCGACGACTGGTTCGAGGTCCTGCTCGATTATCCGCACTGCCAGGTAGCGCTGCGCG CCAGCATGCTCGCCGCCAATCCGGCGCCACGCTTCAATGTGCACGGCGACCACGGCAGCCTGCTCAAGGCCGGCGCCGACATCCAGGAAGCGCAACTGCT CCAGGGACTGCACCCCGGTTCCGCCGGCTGGGGCCGCGATCCCGACCTGCTGCAGCACATCGATGGCCAGGGCCTGCGCCAGTCGCTGGTCACCCCGGCA GGCGACCAGAGCCGCTACTACCAGGCGCTGGCCGCCGCCATCCGCGGCCAGTCGCGCAACCCGGTGTCGGCGCAACAGGCCTGCGCGCTGATGGCCCTGC TGGAGTTGGCACGACGCTCCGCCGAGGAAGGCCGGAGCCTGCCGGTGGAGCTGCGCGACGAGGAACGCCAGGCCTGGAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCCCGGCAGTCCGGCGGAAACCGCGAGGGGATCGTAAGGCGTTAAAAAACAAAAAAATTTCTTCGCCGGTGTTGACACTGCCGCGCTAAACCCGTTTAA TTGCGCCCCGTTGCCCAGGTAGCTCAGTTGGTAGAGCAGGGGATTGAAAATCCCCGTGTCGGCGGTTCGATTCCGTCCCTGGGCACCATGAATACGACGA AAAGGCTCACCTCCGGGTGGGCCTTTTTGCTTTCCGCCGTTCGCCTAGACGTGCTGCCCGCCGTTGACGTGGACTTCCGCGCCATTCACGTAGGATGCGC CGCTGGTGCAGAGGAAGTAGATCAGCGAAGCGATCTCCTCCGGCCGGCCGAGGCGGTGCAGCGGGATGCTGCGCTCGACGATCTCCTCGGTGCCCGGCGA CAGGATCGAGGTGTCGATCTCCCCCGGCGCGATGGCGTTCACCCGCACCCCATGCGGGCCGAAGTCGTGGGCCATCTCGCGGGTCAGCGCGGACAACGCC
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Amino Acid Sequence |
>oxidoreductase
MTPSLSGLPPIRTALIGYGFAGKTFHAPLIRAVPALCLEHVVSRDPGRVHADLPEARVSADPDEAIEAADIDLVVIASPNATHASLAERALRAGKHVVVD KPFTVTLAEARRLADLARERPGQVLSVFQNRRFDSDFLAVEAALQAGSIGPVRYFESAIERFRPQVRDRWREHDLPGSGLWFDLGPHLLDQALCLFGVPQ RVHGHLRRLREGAQTDDWFEVLLDYPHCQVALRASMLAANPAPRFNVHGDHGSLLKAGADIQEAQLLQGLHPGSAGWGRDPDLLQHIDGQGLRQSLVTPA GDQSRYYQALAAAIRGQSRNPVSAQQACALMALLELARRSAEEGRSLPVELRDEERQAWN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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