Pseudomonas aeruginosa WS136, PAWS136_RS18685
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa WS136, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCTAAACAGCCTTCTTGAGCGAGTCGACGGCTTCGTGCAGAACATGCTCGCTACGGTTGCTGGAGTCGAGAGATTGAGAAAGGGGAAGCACCCTGTGGG GAGCCTTCCGGGAGAGGAGTACTTGGTTGCGGGAAGCAACAAGGGACAGCGCGCCTACACATTCATGTGGGAGGTTCAAGGCAAGGAGGAATCGCTAACC GAGCCCAATCTTACTGCGGGACTGGCGGTACTGGAACGCAGCAATGAAAACGGTAAACCACCGCCCCCTGCCTTCAAATCGGATAAAGAAGCATTGGAAC TGTGGGACACCATTGTCGATTCGATTCGCGTGCGCCCGACTTCTTCATCACCGCGAGGTGGAAATGCCGGTCCTTCCCCTGCTCCGAAACCCGCTACGCC TGGCGGCCAAACGCTCGGTGATGACTATGTCTACGAGGAATTCCTCTCCAGCCTGAAGCCGAAAGACAGCTGGCTGGACGACCTATAGGAGCAACCCGCG
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| DNA Sequence for Gene |
>PAWS136_RS18685
ATGAACATCATTCGCCTTGGCGACACCACCAGCCATGGAGGCACGGTGATTGAGGCGTTCGCCCAGACCGACCTCAACGGCAAGCCGATGGCCGGTGTAG GCCACCAAGTGGTTTGCCCCTTGTGCAAGGGAACCTTCCCCATTACCGAAGGTAGCGCCCTGCTGGATGTGAATGGGGTCCCGGTCGCGCTACATGGGAT GAAAACAGCTTGTGGTGCCAGCCTGATTGCCAGTGGCCCGTTGGGCGCTGCCGAAAACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAAAGGGGGACGTTCGATATGCCGAACGACTTCGGCGACCTCCTTCGTGCCTCTCCTGTAGAACGCTCAGGAAAACTCCGCCGGCTTCTTGTCCAGCATG ACCTGCCCAGAGCCTTGGCACCTTGGCCAATCTGCCGTTGTGCACTCCAGCAAGCGCTGGCGGCATTCTCTTTGCTCGTTGAGCGTCTCCATTGCCGCCA GGATCTACTGGCGCTCAGATAGCCGGTTGCTCTCGCGCACGTCGCTGCTTGTAGTCGCCAATGCAAGCAGGCGTTCCGCAAAGACCCATGGCTGATCCCG GGCGACAGGGTTCAAGGCCTTGCTGCACCGGGCTTGTGCCCACTGAGGTAGGGGTCGCTGAAAACTCCCAGCGGCTAGAGCACGTCGGCTATCCGACCAA TGTCGTACACCGCCGGGCGTCCCGGGGGTAGCCGGCGCCAGTTCTATGGATACAGTGGAAGCAGCTCTGGAAAGCCTGTAGTAGACCGATTGGTCAACTA
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| Amino Acid Sequence |
>PAAR repeat-containing protein
MNIIRLGDTTSHGGTVIEAFAQTDLNGKPMAGVGHQVVCPLCKGTFPITEGSALLDVNGVPVALHGMKTACGASLIASGPLGAAEN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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