Strain | Pseudomonas aeruginosa WS136, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAAGCGCTCGACTTCCTCGACCTGCGGCGTGGCTACGAGCCGCTGCTGGACTGGCTGGAGCGGGCCATCGAGTCGATCCGCGCGGGCTACCGCTGCCTGC CGTTCGAGCAGGAGGAGCAGGTATTTTCCGTGCGCCTGCCCGATCCGGCGCCGCGTCAGCGCCTGGTGGTCGGCCTGCGGATGCCCGCCGGCGCCGGCGA ACAGGCGGCGGCTGACTGGCTGGAGCGCGCCATCGTCGCCTCCGACCCGCACCTGCCGTTGCTCGCCCGGCAACGCATGAGCGGGCTGGCGCGGCAACCG ATGAATCGCCAGGAACAGGTGGCCTACAGCGTCGGCGACGACACCCGTTTGTTCGTCGTGCAGGGCGCCGGCGACTGGTTCGATGCCGGCCAGCCGCTGC GCATCGTCGCGCCGGTCAGCGGGGTCGCCAGCAGTCCCTGGCAGATCGTGCTGTTCGTCGCCGACGGCAGCGACAACACCTAGACAGGAAGGAGCCGCCA
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DNA Sequence for Gene |
>PAWS136_RS14255
ATGCCCGAAGGGAGTGCAGGGCCTTTTTCCCAGGCGTACCAGGCGCAGCCGCTCAGCACGGCGTTCCGCCAGGCCTGGCAGGAATGGCTGGAGGCCTGGG GCGCCCTCGACCGGGACGCACAGGATGTGCCGCGGATGGTCGAGCGCGCCCTCGAACTGTCCACCCGTATCACCCGGCGTCTGTGGCGCAGCGCCTTCGC CAGCGTCGGCGACGCGGCGGGCGTGCAGGTCAAGGCGATGGTCTATGCCTTCGTCGCCCTGGTCGACGAGACCCTGGTCTTCAGCGCCTGGCCGGGGCAG GGCGCCTGGCAGGAAAAACCGCTGGAGTCGCATCTCTACGGCAGTCGCCAGGCGGGCGAATACCTGCCGCTGGCGATCAAGCGCCTGCTCGACGAACGCG CCCCGGCCAGTCGCGACCTGGCCAACGTCTACCTGCAATGCCTGATCCTCGGCTTCCGCGGTCGCTTGCGCGGGCCGCGCGGCGAGGCGCTGCATGAGAA GTGGCGGCAGGCGCTGTTCGCCTTCGCCTGGCAGCGCGAGGCGGACGCCGCCGACCTCGGCCGTCGTCTCGAGCAGCCCGCCGCTGCGCCGCCACGGCGT CTGCCGGTGCGCGCGGCGCTGCCGGACGGCTTCCGCCTGGGCCTGGCGGTGCTCGGGCTGGTGCTGCTGATGAGCGGTATCGGACACCTGTTCTGGCGCG ACATCCAGCACGAAATGGCGGCGGTGACCCACCTGGCCGATGCGGAGCAGGCGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCGGCGCGACACTGTTCATGCTGGTTCTCCTCCTGGTGCTGCTGGCGCTGCTGCTGGGGGCGCTGGGCTGGTGGTGGCGAACCCGCGGTGGTACGGAGAT CCGCAGCTTCTACGCAGCGGTCCGGCAGATGGAGCGCGAGCAGGGCTGGCAGGGCCGCTACGAAGCGCCGTGGCTGCTGATGCTCGGCAACGAGACCGAG GGCGAGCAGTTGTGCTCCACCTGGCGTCTGCTGCCGGTGGCGCGCCCGGCCTGGTTCGGCCGCTGGTGGTCGGACGGCGAGGGGGCGATCCTGCTGGTGC CCGAGTCGGTGTTCCTGCCCGACGAGGGCCTGCGCCGGCAAAGCGGCGCCTGGCTGCGCCTGTTGCGTCTGTTCCTGCGCCTGCGTGGCAGGCGCGCGCT GGACGGAGTGGTCTGGAACATTCCGCTGGCGCGGCTGCAGGATGGCGAGCAGGCGGCCAACCTCGGCCTCGCCGCGCGCCGTCGTTTCGTGGAACTGACC
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Amino Acid Sequence |
>hypothetical protein
MPEGSAGPFSQAYQAQPLSTAFRQAWQEWLEAWGALDRDAQDVPRMVERALELSTRITRRLWRSAFASVGDAAGVQVKAMVYAFVALVDETLVFSAWPGQ GAWQEKPLESHLYGSRQAGEYLPLAIKRLLDERAPASRDLANVYLQCLILGFRGRLRGPRGEALHEKWRQALFAFAWQREADAADLGRRLEQPAAAPPRR LPVRAALPDGFRLGLAVLGLVLLMSGIGHLFWRDIQHEMAAVTHLADAEQAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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