Strain | Pseudomonas aeruginosa WS136, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAGTGCCTGAGGCGCGGCCTGATCCTCGAACTGGGCGGCCGCCACGGCAGCGTGGTGCGCTTCCTGCCGCCGCTGATCATCGGCGCCGAACAGATCGACG AGGTGGCCCGGCGTTTCGCCCGCGCCCTCGGCGCGGCGCTGGCCGGCTAATTTTCCCGCCGGGCTTTTCGTTATCCAACGCAAGGGCCGTGCTGCGCGCG GCCGTTCGATCCCATCAGGAGCAAGCAATGACTTCAGTGTTCGACCGTGACGACATCCAGTTCCAGGTAGTGGTCAACCATGAGGAGCAGTATTCCATCT GGCCGGAATACAAGGAGATTCCCCAGGGCTGGCGGGCGGCCGGCAAGAGCGGCCTGAAGAAGGACTGCCTGGCCTACATCGAGGAAGTCTGGACCGACAT GCGCCCGCTGAGCCTGCGCCAGCACATGGACAAGGCGGCCGGCTGAGTGGGCGGTACGCCCGTACGGCTGTTCTGCCTGCCGTATTCCGGCGCCAGCGCC
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DNA Sequence for Gene |
>PAWS136_RS13975
ATGACCTACAGCCGCTGGCGGCGCAAGCTGCCGGCCTGGCTGGCGGTGCGTCCGGTGGAGTTGCCGGGGCGCGGGGCGCGGATGGCCGAGCCGTTGCAGA CCGACCTGGCGAGCCTGGCGCAGCAACTGGCGCGCGAGCTGCACGACGAGGTCCGCCAGGGCCCCTACGCGATGCTCGGGCACAGCCTCGGCGCCTTGCT CGCCTGCGAGGTGCTGTATGCCTTGCGCGAGCTGGGTTGCCCGACGCCGCTGGGGTTCTTCGCCTGCGGCACCGCGGCGCCGTCGCGACGCGCCGAGTAT GACCGCGGTTTCGCCGAACCGAAGAGCGACGCCGAGCTGATCGCCGATCTGCGCGACCTGCAAGGTACGCCGGAAGAGGTGCTGGGCAACCGCGAGCTGA TGAGCCTGACCCTGCCGATCCTGCGCGCCGATTTCCTGCTCTGCGGCAGCTATCGTCACCAGCGGCGCCCGCCGCTGGCCTGTCCGATCCGAACGCTTGG CGGCAGGGAGGACAAGGCCAGCGAGGAACAGTTGCTGGCTTGGGCCGAGGAAACCCGCAGCGGTTTCGAACTGGAGCTGTTCGACGGCGGGCACTTCTTC ATCCATCAGCGCGAGGCCGAGGTGCTGGCGGTCGTCGAGCGCCAGGTCGAGGCCTGGCGCGCGGGGCAGGGCGCCGCGGCGTTGGCGGTGGAGTCGGCGG CGATCTGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCCCGCGAGGGCGCCATAGGCCCTGCGGCGGGTCCGATGTCGACGAAAAAAAGGCCGGTGAGCAGCGCTCCCCGGCCTTTTTCGTTACGAGGCGCGGCT CAGCCTTTACCGGCCAGCAGCCCTTCGACTATCGCTTTCATGTCGCTTTCCAGGCCGGCCACCGGGTCCGCCGCCTCGGTGTCCACCACTACCAGGCGTG CGCCGCTGGCGGCGATGGCATCGGCGAGGGGCTTGGGTGGCTGGCGATGGTGCAGGACCAGGGCGATGTCCTCGCTCTTCAGCTCCTCGGCGAAAGCCTG GATATTGGTCTCGGTCCAGCCGTCGTCGGCCTGGATCTCCACGTCCAGCGGGTCCAGGTTGAGCCCGGCGAGCAGGTAGCCGAGGCGTTCGGAGAGGCTG ATCACGCTGAGGTTGTCGGCCTTCGCCAGGCGAGTCTCGTTGCTGGCGGTCGCTTCCAGCAATTGCTTCTTCAGCGTCGCCAGGTTGGCCTGGATGGTCG
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Amino Acid Sequence |
>thioesterase
MTYSRWRRKLPAWLAVRPVELPGRGARMAEPLQTDLASLAQQLARELHDEVRQGPYAMLGHSLGALLACEVLYALRELGCPTPLGFFACGTAAPSRRAEY DRGFAEPKSDAELIADLRDLQGTPEEVLGNRELMSLTLPILRADFLLCGSYRHQRRPPLACPIRTLGGREDKASEEQLLAWAEETRSGFELELFDGGHFF IHQREAEVLAVVERQVEAWRAGQGAAALAVESAAIC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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