Strain | Pseudomonas aeruginosa WS136, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGAGGCCGGGATAACCGTCCTCGCCGATGCCCACCAGGGTCAGCCAGGGCGGCGTCGAGTCTGCCGATGACACGGTTCCGATACTCCTGAAATGCGTCT GTGAAGGGCCCGCGACGGCTTCCGGACGGAATGGGTTTTCCCGGCCCCGGGCTGGGCGGCATAATAGCGCGTTCGTCGGTGCCCGGCCCTTTCGCGTTAG CGCGGGGCCAACGAGGGCCGAAGAGGGAACACGGAGCCGCGGTCTTTTCGAAGCCCGGGCCTAGCCGTGGCTGCCCCCGCAACTGTATGCAGCCTGTATT CGCGCCATTCGCCACTGGATTACCGGGAAGGCGGCGCGAAGCGGAGGTTCCTCCCCCGGGTGGAACGCCGGGCTGCGAGCCAGGAGACCTGCCGCCGAAA CCAGTCGCGAGTGCCAACATCGGGCGGGGTGTACCGATGCCGTGGTCTGTCCCTGGGGGACAGCGGTGCGGTCGCCGCGACGCCGATTCGAGTAGCGTTT
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DNA Sequence for Gene |
>PAWS136_RS10335
TTGAACGACGACCAGACCCCGGCGCCCCTGCCCGTACCACGTCCGTCGCCCTGTCCCGGCCTGCTGCGTATCGTCCAGGCGCTGGACGGCGGCATCTGCC GCATCAAGCTCGACGCCGGCCGCCTGGACGCCGCCCAGGCACGCGCCGTGGCGGCCGCGGCGCGGGATTGCGCCAGCGGCGTGATCGAGGCGACCAACCG TTCCAACCTGCAATTGCGCGGCGTCCGTCGCGGCGAGGAAGAGCGGCTTGTCCGCCGCCTGCTGGACGCCGGCCTCGGTCCCCGGCATGGGTCCCTGGCC GGCGCCGACGACGTGCGCAACCTTATGCTCAGCCCGGCCGCCGGGCTCGATCCGCACCTGTCGCTGGACGTGCGCCCGCTGGCCGCTCGGCTGTTGCTGC GGCTCCAGGCGGACAGCCGCTACCACGCGCTGTCGGCCAAGTTCGCCATCCAGCTGGACGGCGGCGAAGACCTGGCGATGCTCGAACATCCCCATGACAT CTGGCTCTCGCCGATGCCCGCGGCGCCGACCGCGACGCTGGTCTTCGGACTCGCCGGCTGCCCGGCCCGCGACCGCCCCCTGGCGGCGTTGCCGGCGGAG CGGGGCGAGTCCCTGGTGCTGGCGTTGCTCGACCTGTTCCTCGAGCGCGCCCAGCCGCAACAGACGCGGATGCGCCACCTGTTGCAGGAGCTGGACGGAG AACCCTTGCTGGAGGCCTTGCAGGCGCGCCTGGATTTCCCTCTGCGGCGTGACGAGCGGGTGGCGGCCTGGCGGCGTTCGCCGGGGCGTCCGTGGAGTCA TCTCGGCGTCCAGCCGCAACGCCAGCCGGGCCTGGTGATGGTCGGCGCGGCGGCGCCGCTCGGCCGGCTCGACAGCGCTTGCCTGGAAGGCCTGGCCGAG CTGGTCGAACGCCATGGCGACGGCAGCCTGCGCCTGACCCCCTGGCAAGGCGTGCTCCTGCCGAACCTGGCGCATGCCGAGGCCGACCAGGCGCTGCTCG GCCTGCGCGGACTCGGCCTGCTGACCGAGCCCGATGCGCCGTTGGCGCGGCTGATCGCCTGCAGCGGTTCCAGCGCCTGCGCCAGAGGCCTGGCCGACAC CAAGGGCGACGCCTTGCGCCTGGCCGAACGCCTCGGCCCGCGCAGCGACCTGCCGCAACTGCACCTGTGCGGCTGCGAACGGTCCTGCGCCGCCGCCCAC CGCGCGCCGCTCACCCTGCTGGCGCGCAGCGGCGGGTTCTACGACCTGTACCGGCACGACCCATGCCACCCCGGATTCGGCCAGTTGCTGGCCAGCCGCC TGACTTTCGCCACGGCCGCCGACTACCTGGCGGCCCTGCCTTCCCAGCCCACTTCCGGAAAACCCGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTGACTACATCCGCGATGGCCAGGCGATCTATCGCCAGTCGTTCGCCACCATCCGCGCCGAAGCGAACCTCGCCGGCATCCCGGCCGACCTTGAAAAGCT CGCGGTCAGGGTGATCCACGCCTGCGGCATGGTCGACGTGGTCGACGACCTGCGCTTCTCGCCCGGCGCCGGCGCCGCCGGCCGCGCCGCGCTGGCCGCC GGCGCGGCGATCCTCTGCGACGCGCGGATGGTCGCCGAAGGCGTGACCCGCTCGCGGCTGCCCGCCGCCAACCGGGTGATCTGCACCCTCAACGAAGCGG ACGTGCCGGCGCTCGCCACGGAACTCGGCAATACCCGCTCGGCGGTGGCCCTGGAGCACTGGCGCGAGCACCTGGAGGGCAGCGTGGTGGTGATCGGCAA CGCGCCGACCGCGCTGTTCTACCTGCTGGAAATGCTCGACGCCGGCGCGCCGAAACCGGCGCTGATCCTGGGCTTCCCGGTCGGCTTCGTCGGCGCCGCG
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Amino Acid Sequence |
>precorrin-3B synthase
MNDDQTPAPLPVPRPSPCPGLLRIVQALDGGICRIKLDAGRLDAAQARAVAAAARDCASGVIEATNRSNLQLRGVRRGEEERLVRRLLDAGLGPRHGSLA GADDVRNLMLSPAAGLDPHLSLDVRPLAARLLLRLQADSRYHALSAKFAIQLDGGEDLAMLEHPHDIWLSPMPAAPTATLVFGLAGCPARDRPLAALPAE RGESLVLALLDLFLERAQPQQTRMRHLLQELDGEPLLEALQARLDFPLRRDERVAAWRRSPGRPWSHLGVQPQRQPGLVMVGAAAPLGRLDSACLEGLAE LVERHGDGSLRLTPWQGVLLPNLAHAEADQALLGLRGLGLLTEPDAPLARLIACSGSSACARGLADTKGDALRLAERLGPRSDLPQLHLCGCERSCAAAH RAPLTLLARSGGFYDLYRHDPCHPGFGQLLASRLTFATAADYLAALPSQPTSGKPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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