Strain | Pseudomonas aeruginosa WS136, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTTTTGTCCAGCAATGACTCACTCAGAATCCTAGGGAAGGGGTTAACACAGTGACGCTCTATCGCCTCCACGAAGCCGATCTCGAGATTCCCGATGCCTG GCAGGACCAGAGCATCAACATCTTCAAGCTCCCCGCCAGCGGCCCCGCCCGCGAAGCCAGTTTCGTCATCAGCCGCGACGCCAGCCAGGGCGACGCGCCG TTCGCCGACTATGTCGCCCGCCAACTGGAGAATGCCGAGAAGCAATTGCCCGGCTTCAAGCTGCACAAGCGCTGGGACATCAACATTCACGGCCACGCCG CCGTGCTCCTCGACTACCAGTGGCAGCGCGAGGGCCGCGACCTGATGCTGCGCCAGGTATTCATCGAGCGCCGCCCGGCGGTGCTGATCACCACCCTGAC CACCACCCCGGCTGACCTGCCGCACCACGAGCCGGCCTGGAAGCAGGCGATGCAGACCCTGGTCCCGCGCCCGACCCCTAGCTGACCCGAGTACCGACGC
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DNA Sequence for Gene |
>PAWS136_RS00490
ATGGATGCGCAAGCCGCCGCCCGACTGGGCGATGAGATAGCCCACGGTTTCGGTGTCGCCGCGATGGTCGCCGGAGCCGTGGCCGGAGCCCTGATCGGCG CCGCCGTGGTCGCCGCCACCGCCGCCACCGGCGGCCTGGCCGCGGTGATCCTGGCCGGTTCGATCGCCGCCGGCGGGCTGTCGATGTTCCAGATCGTCAA GGGCCTGACCACCATCTTCGAGCTACCCAAGCCGACCACCGGGGTGCTCATACGCGGCAGCTTCAACGTCTACGTGAACAGTCGCAACGCGATGCGCGCC GGCGACGACGTCTCCGCCACCTGCAGCGGCCTGCCGCTGAACCATCCGCTGTGGCCGTTCCCGGTGCTGATCGCCGAAGGCAGCGCCACCGTGTACATCA ACGGCAAGCCGGCGGCGCGCCTGCAGAGCAAGATGGTCTGCGGCGCGCACATCAAGACCGGCAGCCAGGACACCTTCATCGGCGGCCCCACCGAGCGGGT GGCCTTCGTCCTCGACCTGGAGGAATGGCTGCACACCGGCCTCGAGGCGCTGGGCCTGGCGGCCCTTGCCGGCGGCCTGCTGCTGGCGGCGATGGCCGGG GTCGCGGCGCTGGCCGGCTTCGTCGCCATCGGCGGGCTGATGATGGGCGGCATGGCCCTGCTCGGCGACCTCGGCGACCGCCTCGGTCCCGGCTACCGCG ACCTGTTCCAGGGCGTGGCCGGCATGGCGCTGCTGGGCTTCGGACCGAAGATGGCACGGCTCGGCAACGCACCCAAGGGCGCGCCGAAGACCCAGGTGCC GAAAGGCTTCGAGAAGGTCTATGGCAAGGCGCCGGCAGCCAAGGCCGAGATCGACGCGGTGGCCGACGGACTGGCGGCGAAGCACGGCGGCAGGGTCGCC AAGGCACCGATCAAGTCGCGCGAACGCGCCATGCAGAAGATCAACAACGACTACAAGGGCGATCCGACCAAGATCAAGGATCTGGCCCGCAACACCATCA TCGTCGAAGGCGACAAGGTGAACACCGTTGCCGCCGAGCTGGCCAACCGCGGCGCCAAGGTCAAGGTGATCGACGGCAACGCCGACCCGCTCGGCTACAG CGGGGTGAACTCGACGATGAACACCAAGGCCGGGATACCCGGCGAGATCCAGGTCAACTCGCCGGAGATGATCTACGCCAAGGAGTCGGAGGACATGGCT CGCATCCTCCTCGGCAACGACACCTACGACGCGGTGGCGGCCAAGGCCGGCGTACCCGGAGGGCAGGGCCACAAGTACTATGAGGACTGGCGGGTACTGG ATCCGAAGTCCCCGGAGGCCCAGGCCATCGCCGAGAAGAGCCGGGCGTACTACGACGCAGTGAGGAAAGGCAATGGCAATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AAAGGGCGAAGCGTTCGCCAGGCGCGATATCTACATCGACTACGACTTCGAAGACGTCACCTACCGCTGGGACCATCGGCAGGGCACGATCCACGTGCGC TTCTACGGCGAAGCCGAATCCCCCGAGCCGGTTGAGCACGACAACCGCCTGTTCAACGATGCGCTGCGTTTCGGCCGGGAAATCACCCGCGAGGAGTACG AGACGGGCTTTCCCAAGGGCTGAAGCGGCGCAGCCATGTCCCCCGTGAACTATGTCGAACGCGCCCTGGCGCTGGTCGCCGAGCGGCTGGCCCGGCATCC GCAATGCGGGATGCTGCTCTCCGTGGAAAAGCAGTTGCTGTACCTGAAAGCCGTGCTGCTCGACCGCAGCCTGGACCGTTCCGCGTTGCACCGGCTGAGC TTCGGCGGCATCGCCGGGAAAGAGTTCGAGGAGACCGACCCGGAACTCGCCAGGGCCCTCAAGGACGCATTCTACGTCGGCATACGCACTGGCCGCGGCC
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Amino Acid Sequence |
>hypothetical protein
MDAQAAARLGDEIAHGFGVAAMVAGAVAGALIGAAVVAATAATGGLAAVILAGSIAAGGLSMFQIVKGLTTIFELPKPTTGVLIRGSFNVYVNSRNAMRA GDDVSATCSGLPLNHPLWPFPVLIAEGSATVYINGKPAARLQSKMVCGAHIKTGSQDTFIGGPTERVAFVLDLEEWLHTGLEALGLAALAGGLLLAAMAG VAALAGFVAIGGLMMGGMALLGDLGDRLGPGYRDLFQGVAGMALLGFGPKMARLGNAPKGAPKTQVPKGFEKVYGKAPAAKAEIDAVADGLAAKHGGRVA KAPIKSRERAMQKINNDYKGDPTKIKDLARNTIIVEGDKVNTVAAELANRGAKVKVIDGNADPLGYSGVNSTMNTKAGIPGEIQVNSPEMIYAKESEDMA RILLGNDTYDAVAAKAGVPGGQGHKYYEDWRVLDPKSPEAQAIAEKSRAYYDAVRKGNGN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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