Pseudomonas aeruginosa AZPAE14379, NQ53_RS09545
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14379 AZPAE14379_contig_4, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AATACCCCGGTCGAAGGCATGAAGCCGCGTACCGCCCTGGAACTGGAAGGTCGCGACATCTACATCCGCGAAGGCTGCGTCGGCTGCCACTCGCAGATGG TCCGTCCGTTCCGTGCCGAGACCGAACGCTACGGCCATTACTCGGTCGCCGGTGAAAGCGTCTGGGACCACCCGTTCCTGTGGGGTTCCAAGCGTACCGG CCCGGACCTGGCCCGCGTCGGCGGCCGTTACTCCGACGACTGGCACCGCGCGCACCTGTACAACCCGCGCAACGTGGTGCCCGAGTCGAAGATGCCTGCC TACCCGTGGCTGGTAGAGAACAAGCTTGATGGCAAGGACACCGCCACCAAGATGGAAGTCCTGCGCAAGCTGGGCGTGCCTTACACCGACGAGGACATCG CCGGTGCACGTGAAGCCGTGAAGGGCAAGACCGAGATGGACGCCCTGGTGGCGTTCCTTCAAGGCCTGGGAACCTCTATCAAGAGCAAACGGTGAGTGTG
|
|
| DNA Sequence for Gene |
>NQ53_RS09545
ATGGATATCGGGACTCTGCGTGGACTGGGCACCGTGGTGATCATGGTCGCCTTCATCGGCCTGGTGATCTGGGCCTACAGCGGCAAGCGCAAGAAGAGCT TCGACGAAGCGACGATGCTGCCCTTCGCAGACGATCCCGAAGCCAAAAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CGACCTTCTGGAGTCTGTACATTACAGCTCTCACCCTCGGCACCCTGCTGGCGCTGACCTGGCTGATCTTCGCCACCCGCAAGGGCCAGCGCAGCAGCAC CACCGACGAGACCGTGGGCCACTCCTACGACGGCATCGAGGAGTACGACAACCCGCTGCCGAAGTGGTGGTTCATGCTGTTCGTCGGCACCCTGGTGTTC GCCGTGGGGTACCTGGCCCTGTACCCGGGCCTGGGCACCTGGAAAGGCCTGATGCCGGGCTACCAGTCCGCCGACGAATTCGCCGACAAGGAAAAAGGCT GGACCGGCGTCCACCAGTGGGAAAAGGAAATGGCCAAGGCCGACGAGAAATACGGCCCGATCTTCGCCAAGTTCGCCGCGATGCCCATCGAGGAAGTCGC CAAGGATCCGCAGGCGGTGAAAATGGGCGGTCGCCTGTTCGCCTCCAACTGCTCGATCTGCCACGGCTCCGACGCCAAGGGCGCCTACGGCTTCCCCAAC
|
|
| Amino Acid Sequence |
>cytochrome C oxidase cbb3-type subunit CcoQ
MDIGTLRGLGTVVIMVAFIGLVIWAYSGKRKKSFDEATMLPFADDPEAKKHVEQASRSNKE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|