Strain | Pseudomonas aeruginosa strain AZPAE14379 AZPAE14379_contig_17, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGCCTCGATGGCCACCAAGCAACTCTCGCAGAAGGGCGGAGCGGTGCTCCTGGAGCCGGTGATGAAGGTCGAGGTGGTGACCCCGGAGGACTACATGGG CGATGTGATGGGCGACCTCAACCGCCGGCGTGGCCTGATCCAGGGCATGGAGGATACTCCGGCGGGCAAGGTGATCCGTGCCGAGGTCCCGCTGGGCGAA ATGTTCGGCTATGCCACCGACGTGCGCTCGATGTCCCAGGGGCGCGCGAGCTACTCGATGGAGTTCGTCCGCTATGCCGAGGTACCGGCCAGCGTGGCCG AGGCGATCATCGCCAGGCAGGGCCGCTGAGAGCCGCCGCGCGCCGCCGAGGCCAGCGGCGGCGCGCGCCTTTGCGGGAGCGGCAGCCGCATCTTCGGCGC CGATGCGCTTGCCAAGCGGGGTTTTTGACGCCCCCTGGATGCTTAACTATAAGACAGTGACCAAGGCCCGCACCTATACGGTCACAAGGATGGCGAATCG
|
|
DNA Sequence for Gene |
>NQ53_RS22540
ATGCTTGCTTCAGCGATTGCCAGCGGTACCGCAGTCTCCCAGGTCTCCAAGCATCTCCTAATGTTCCTGGCCGCCCTTTTCCTCGCCCTCGGTGCATGCG GCTGGGCGATCCTGCACATCGCCAGGCACCAGGACGACATCGCCATCGAGCAGAGCCATTTCTACGTGGAAAAGGCGCTGCAGAATCGCCGGGAAAATTC CGAGCAGTTCTCCACCACCTATTCCTTCTGGACCGATGCTTACGTCTATCTGGGAAACCGGGTCGACGTGGACTGGGCCTTCACCAAGAACAACCTCGGC TCGGTGCTCTACACCACCAACGGCTACGACGGCGTCTTCGTCATCGACGACCGTGGCACTCGCTACGCCATGCTCGAGGGCGAGCTTTCCGAACGCTCGC TGGCCGACTCGCTGAACGCCGACACCGGGGACATCCTCCGCTCCGCACGCCGTGCCGCGGTGGACGAAGCGGCGATCAGCCGCTACGTCGACTTCGACGG CGCACCGGCGATCCTGGTTGCCTCGGCGATCAAGCCCACCAGCGATCATGCGCCCATCGACCTGGCCAAGGCCTCGGTGATGGTCTTCGTCGACCGGCTG ACCCCGGCGAAGCTGGCCAAGCTCGGCGGCGACTACGGCATCGCCAACCTGCACCTGCTGGCCGGCGGCGCGGCGGGCGACAAGGAAAGCCTTGCCCTGG AGGGCACTCCCCATCGCCTGGCCTGGGTGTCGTCGCGTCCGGGTAGCGCCATGCTGCGGGAGACCGCGTTGCCGCTGCTGGGAATCTTCGTGCTCGCCGC CGGGCTGCTGTTCTGGCTGAGCCGCAGCGCCGTGCTCAACGCCCGCGCGGTGGATCGCCAGCAGAAGGTCCTGAAACGCAGCAACCAGGCCCTGCTGGCC AGCGAGGAACGTTTCAAGTCGATAGCCGAGGCGGCCTCGGACTGGATCTGGGAAGTCGACGGGCATTTCGTCTTCACCTATCTCTCCGTGCGCTTCCGCG ACGTCACCGGCTACCAGCCGGAGGCCTGGATCGGGCGGCGGCTGGACGAGTTGCTGGATAGCGATACGGTGAACATCGTCAAGTGGCTGGAAGGGCTGCC CGATGCCGGTGCGCCGTCCAGCCTGGTCTGCGCTTTCCGCGACAGCCAGGGCCAGGCGCGGGTCGGCAAGCTGAGCGCCAGCGCGATCCGCAACGGCGTC GCCAGCGGCTATCGCGGCACGGCGGCCGACATCACCGACGAGGTCGAAGCCCATGCGAAGATCCAGCATCTGTCCCTGCACGATGCCCTGACCGGCCTGC CGAACCGCAACAAGCTGTTCCAGTTCCTCGAACGCCTGCTGGCGGAAAAGGCTGGCAAGTCGCCGGTAGCGGTACTGATGCTCGACCTCGACCGCTTCAA GCCGATCAACGACCAGCACGGCCATCCCGCCGGCGATGCGGTGCTCTACGCCATCGCCGAACGGCTGCGCGCCTCGACCCGCGACCAGGACATGGTTGCC CGGCTCGGCGGCGACGAGTTCGTGGTGGTCAGTACCCACGTGTCGTCGAAGCTGGAAATCGAGAAGTTCTGTAGCCGGCTGATCGACGTGATCAACCGCG AGGTCGCCTACGAAGGGCACAGCTTCCATGTCGGCGCCAGCATCGGCGTGGCCCTGGCGCCGGAGCACGGCGGCGATCCGCGCGGCCTGCTGCGTTGCGC CGACGTGGCGATGTACGAGGCCAAGGCCGCGGGGCGCAATACCTGGCGTTTCTACTTGGAAGCGATGGACTCCCATCTCGCCGAGAAGAAGCTGCGCGAG ACCGAGTTGCGCGCCGCCTTGCAGAACGGCGAGTTCGAGTTGTACTACCAGCCGCGTTTCCTGGCGCAGGAACAGACGATCGCCTCGGCGGAGGCGTTGA TCCGCTGGAACCATCCGCGCCGCGGGCTGATCGGCCCGGACGAGTTCATCGGCCTGGCGGAAGAAAGCGACCTGATCGTACAGATCGGCAACTGGGTGCT GCGCGAGGCCTGCGCCACCGCCGCCAGCTGGCCAGGCGAGGTGATGGTCTCGGTGAACGTGTCGCCGGCGCAGTTCATGACCGGCGATATCGTCTGGCAG GTGCGCGAGGCCCTGCGCCTGGCCCGCCTGGATGCTCGCCGGCTGGAGCTGGAGGTGACCGAGAACGTCATGCTCAACGATATCGATGGCGCGCTGCGGA CCATGACGGCCCTCAAGGAGCTGGGCGTCCGCCTCAACATGGACGACTTCGGTACCGGCTATTCCTCGCTCGGCTACCTGCGCACCTATCCCTTCGACAG CATCAAGATCGACAAGCGCTTCGTCGCCAGCATGGAGAAGACCGGGCGCGACCGTTCGATCGTGCAGGCCATCATCAATCTCGGCAACGCCCTGAACCTG CGGGTCACCGCCGAGGGCGTGGAGACCGAAGGGCAGATGCACATCCTGCGCGACGAGCAATGCCACGAACTGCAAGGGTTCCTGCTCAGCCGGCCGCTGG ATGCGCAGCGCCTGCGCGATCTGCTGGAGCGCGAGGCGGGGCAGACCCAGGCGCCCCAGGTTTCCGCCGAAGGCCATGCTGCGCGCCGGCCTTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGGGCGTCAGAAGGGCGCACGCGGTGCCTCGGCGGCCCTCGGTTCAGCGATCGCCCTGCGTATGGTTCAGAAAATGCTGAACTGATTATTTGACCTGAC TGATTCCCTTCCCGTCTTCGCTTGCCGACACTCCGTCCTTCCCATGGCCTTGTGCCAGGGCCAGCGCCGGTGGTCCCCACCCGCTTCGGGCGAATCGCGG TGATGGTCTGCTACGACCTGGAGTTTCCCGAATGGGTGCGCCTGCCGGCGCTGTCCGGCGCACAACTGCTCTGCGCACCGGTGAACTGGCCGGCGGCACC GCGTCCCGAGGGCGAGCGGCCGGGCGCGGCTGGGCGAATGAAAAAGGGCGCGGGCCAGTATCGGCGCCGCGCCCTTTTGCCGGAGGAGAACCTTATTCCA GTTCGGCTGCGCTCTCTTCCTGGCGCTTCAACCCGGTATGACTGATGGCGTGCAGAGCGGTATTGAACTGTACGGTCTCGTTGAAACCCTTGACGATCTG
|
|
Amino Acid Sequence |
>histidine kinase
MLASAIASGTAVSQVSKHLLMFLAALFLALGACGWAILHIARHQDDIAIEQSHFYVEKALQNRRENSEQFSTTYSFWTDAYVYLGNRVDVDWAFTKNNLG SVLYTTNGYDGVFVIDDRGTRYAMLEGELSERSLADSLNADTGDILRSARRAAVDEAAISRYVDFDGAPAILVASAIKPTSDHAPIDLAKASVMVFVDRL TPAKLAKLGGDYGIANLHLLAGGAAGDKESLALEGTPHRLAWVSSRPGSAMLRETALPLLGIFVLAAGLLFWLSRSAVLNARAVDRQQKVLKRSNQALLA SEERFKSIAEAASDWIWEVDGHFVFTYLSVRFRDVTGYQPEAWIGRRLDELLDSDTVNIVKWLEGLPDAGAPSSLVCAFRDSQGQARVGKLSASAIRNGV ASGYRGTAADITDEVEAHAKIQHLSLHDALTGLPNRNKLFQFLERLLAEKAGKSPVAVLMLDLDRFKPINDQHGHPAGDAVLYAIAERLRASTRDQDMVA RLGGDEFVVVSTHVSSKLEIEKFCSRLIDVINREVAYEGHSFHVGASIGVALAPEHGGDPRGLLRCADVAMYEAKAAGRNTWRFYLEAMDSHLAEKKLRE TELRAALQNGEFELYYQPRFLAQEQTIASAEALIRWNHPRRGLIGPDEFIGLAEESDLIVQIGNWVLREACATAASWPGEVMVSVNVSPAQFMTGDIVWQ VREALRLARLDARRLELEVTENVMLNDIDGALRTMTALKELGVRLNMDDFGTGYSSLGYLRTYPFDSIKIDKRFVASMEKTGRDRSIVQAIINLGNALNL RVTAEGVETEGQMHILRDEQCHELQGFLLSRPLDAQRLRDLLEREAGQTQAPQVSAEGHAARRP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|