Pseudomonas aeruginosa AZPAE14379, NQ53_RS22290

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14379 AZPAE14379_contig_17, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCTGAGCGGCGGCGGAAAAAGCTTGCTGCGCAAGGAGAAGCGCCTGCGGGTGAACATGGAAATTGCCCGGGAAAAGTCGACGGTAATTATTCGTTGAGT AACAGGGAAGTGCATACTTCCAACTTGGAAGTTAACTGCATGGCACCATCCATGCATTACACGGATGACGGTTTTTATTATAAGTCCAAACTGGCGAAGA CAAGCAAGAGAGGCCGGGATGCCAGAGTTCCATAGTCGGAAATACAAGCGTTGCAATGTCGACGGATAGCACGAAGAGGCGGCGGTACCCTGCGAAACGA GGCAATTCCCCGAGTGGCGGGCACTCGAACGGATTTATAAGTCCGCCGTTCGGCGTTCACCTCGACGCCTGTGCACGGGATACTTATATCGGTGGTTCGC ACCACTGATTATCGATTTGAACTCGTTCGAGTCTTTACCGCGTTCCCGGCCGAAATAAAAGGCGGGTGGACGATTATTGCCTCACACAAGGAACATAGGC
DNA Sequence for Gene
>NQ53_RS22290
ATGACCAGAACTTCGAACCCATGCGCAGTGGTATTGGCCTTTGCGGCAATTGCCGCTTCGGGAACCGCGATGGCGGCAAACACTATCACATTCAGCGGCG AAGTGACCGACCAGACCTGCCAGGTCGCGGTCAACGGCTTCACCGACCCCACGGTGATCCTCGACAGCGTACCGGTGAGCGCCCTCGATGGCGCAGTGGG CCGCAGCGCCGGCGAAACCGCCTTCACCCTGCAACTCACCGATTGCGTCGCGCCGACGGCCGACGAGCATTTCACCACCCTGTTCCAGGCCACCAACCCC AGCGCCGCCGGGAACCTGGTGAACACCGCCGCCAGCGGCGCGACGGGCGTGGCGCTGCAATTGCTCGATAGCGTCGGCGGCAACCCGGTCGACCTGGCCG GCGGCGCGGCGGTGCCCGCCGGCGACATCGTGCTCGCCAACGGAGCCACCAGCACCAGCTACGACTACGCGGTGCAGTACGTCTCCGAAGCGGCGACCGT GACGCCCGGTCCGGTACTCGGCGCCGTGACCTACACGCTGCGTTACGAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATGCCGGCGGCGCATGCGCCGCCCCTTCCTTTTCCCAGCACTAAAGCCGGGCCCGGTCGCTGGACCGTGCCCGGCCAGGTAAGCCGCATGCCCAGACATT CGTACCGATCCGGCAGGACATCGGCGCTTCTGCTCGTCCTGCTGGCGAGCATCGCCCAGGCGCGGGCAAGCGTGGTGGTGACCGGGACCCGGGTGATCTA TCCCGGCGAGGCACGGGAGAAGACCGTGCAACTGAGCAATCGCGATGCGTTTCCCAACGTCGTCCAGGCCTGGGTCGACATCGACGCCCCGGACGCGCCG CCGGACCAGGCGGACGCGCCGTTCCTGGTCAACCCGGCGGTATTCCGCATGGCCCCGGACAGCGGCCAGACGCTGCGCATCGTCTACACCGGGCAGGGCC TGCCGGGCGATCGCGAATCGCTGTTCCATCTCAACGTCCTGCAGATCCCGCCACGCAACGGCAGCCATGCGGATCGGAACCAGATGCTGCTGATGCTGCG
Amino Acid Sequence
>fimbrial protein
MTRTSNPCAVVLAFAAIAASGTAMAANTITFSGEVTDQTCQVAVNGFTDPTVILDSVPVSALDGAVGRSAGETAFTLQLTDCVAPTADEHFTTLFQATNP SAAGNLVNTAASGATGVALQLLDSVGGNPVDLAGGAAVPAGDIVLANGATSTSYDYAVQYVSEAATVTPGPVLGAVTYTLRYE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site