Pseudomonas aeruginosa AZPAE14379, NQ53_RS17865

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14379 AZPAE14379_contig_12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGCCCGATGGCAAGGACGCCCAGGGCCGCGACCGCTGGGAGGCCATCGCCAACGGCAATGACGGCGCCGCCCTCGGCCGCGAGCTGGAGATCGCCGACCT GCTGCGCTTCGTCCAGCGCGCCGGGGTGCGCAACACCGTCTGGCTGACCGCCGACGTGCATTACTGCGCAGCCCACCACTACAGCCCGGAGCGCGCCGCG TTCAAGGACTTCGCGCCGTTCTGGGAGTTCGTCGCCGGGCCTCTCAATGCCGGTAGTTTCGGACCCAACGCGCTGGATGGCACGTTCGGCCCGCAGGTGA TGTTCCAGAAGGCCCCGCTGGTCCAGAACAGTTCCCCCTTCGCCGGCTACCAGTTCTTCGGCGAGGTGGAGATCGATGCGCAAAGCCGCGCGCTCACCGT CACCCTGCGCGACCTCGACGGCGAGCCGGTGTTTTCCCAGGAACTGCAGCCCGACGGCGCCTGAGCCGCGGCGACCCCATTCCGATAAAGGAGTATCCCG
DNA Sequence for Gene
>NQ53_RS17865
ATGCACCCCTTGCGTAACGCCGCCCTGCTGGGCGGCCTGGCCCTGCTGGGCCTGCCGGTGGCCAACGCCGCCGAGCTGATCATCTCCGAGTATGTCGAAG GCAGCGGCAACAACAAGGCGCTGGAGTTCTACAACAGCGGCAGCCAGGTCCTCGACCTCTCCGCCTACCGCGTCGAGTTCTATTTCAACGGCGCCAGCGC GGCGGGCCGCAGCATCGACCTGAGCGGCAGCCTGGCGCCGGGCAAGACCTTCGTCCTCGCCAACGGCGTGGCCGACCCGGCGTTGCTGGCGCTGGCCAGC CAGCGGGTGGAAGGCAGCTGGTTCAATGGCAACGATGCGGTGCTGCTGCGCCGGCGCGGCGGCGAGATCCTCGACAGCCTCGGCCAGGTCGGCTTCAACC CCGGCACGACCTGGGGCAGCGGCGATGTGCAGACCCTCGACCGGAGCCTGGTGCGCAAGGCCGACATCCGCGACGGCGACAGCGATCCCAGCGACGCCTT CGACCCGGCGGCGCAATGGCTGGGCTACCCGCGCGACACCTTCGCCAACCTCGGCCAGCATGGCGCTGGTGAGCCCGGCGGCGGCGAGGAGGCCGGCCTG CGACCGATCCACGAGGTGCAGGGCGCCGGCGCCGAAAGTCCGCTGGTGAACCAGCGGGTCGCCATCGAGGGCGTGGTGGTCGGCGACTTCCAGAACGCCA GCGAGCTGAAGGGCTTCTACGTGCAGCAGGAAGATGCCACGGTGGACGGCGACCCGGCGACCTCCGAAGGCATCTTCGTCTACGACGGCGGCAACGGCAG CGACGTCAAGCTCGGCGACCGCGTCCGGGTGACCGGCCAGGTCCGCGAGTTCAACGGCCTCACCGAACTGGTCGGGCCGCTGCAGGTCAGCGTCCTGGCG AGCGGCGTGGCCTTGCCGACGCCGGCCGGCATCAGCCTGCCACTGGCCAGCGCCGATGCGCTGGAGCGCTACGAAGGCATGCGCGTGCAGCTCCGCCAGA CGCTGACCGTCAACGAGGTCTACAACCTCGGCCGCTACGGCGAGGTCCTGCTGTCCTCCGGCGGCCGCCAGATGACTCCGACCAACGTGGTGGCTCCCGG CGAACAGGCCAAGGCCATGCAGGCGCGCAACGACCTCGACCGGATTCTCCTCGACGACGGCCGCAGCGGGCAGAACCCCGACCCGATCCGCTACCCGGCA CCGGAACTGAGCGCCTACAACAGCCTGCGCGTCGGCGACCGTACCAGCGCCATCGACGGCGTGCTCGACTACTCGGCCGGCAGCTACCGTATCCAGCCGT TGCAGACGCCGACCTTCGAGGCGGCCAATCCGCGTCCGGCCCAGCCGGCGGTGGAAGGGCGCCTGCGGGTGGCCAGCTTCAACGTGCTCAACTACTTCAA CGGCGATGGCAAGGGCGGCGGTTTCCCCACCTCGCGCGGAGCCAACACGGCCGAGGAGTTCCAACGGCAGAAAGCGAAGATCGTCGCGGCGATCCTCGCC TCGAAGGCGGACATCGTCGGCCTGATGGAGATCGAGAACGACGGCTACGGCGAGTTCAGCGCCATCGCCGACCTGGTCAACGGCCTCAACGCCAGCCTGC CCCAGGGCCAGCGCTATGCCTTCGTCAACCCGAACCGGGCGAAGCTGGGCAGCGACGAAATTGCCGTGGGGCTGATCTATCGCGGCGACAAGGTCCGCAC CTATCGATCCGCGGCGGTGCTCGACAGTTCGGTGAACCCGGAGTTCGACGATACCCGCAACCGTCCGACCCTGGCCCAGACCTTCCAGGAGATCAATGGC GGCGAACGCCTGACCATCGCGGTGAACCACCTGAAGTCGAAGGGCTCGGCCTGCGACGGCGACCCGGACACCGGCGACGGCCAGGGCAACTGCAACCTGA CCCGGGCGCGCGCCGCCCAGGCCCTGGTGGACTGGCTGGCGGGCGATCCGACGGGCGCCAAGGAGCCTGACCGCCTGATCATCGGCGACCTCAATTCCTA TGCCAAGGAAGACCCGGTGAACGTCATCCGCAGCGCCGGCTACACCGACCTGGTGGCGCGTCAGGCGGGCGCAGGAAAGGGCTATTCCTACGTGTTCTCC GGGCAGTCCGGCTACCTTGACCACGCCCTCGCCAACGCCAGCCTGGCGCGCCAGGTACGCGGCGCGGTGGAGTGGCACATCAACGCCGACGAGCCCCGGG TGCTGGACTACAACGTCGAGTTCAAGACCCCTCGGCAGCAGGACAGCCTGTACAACGCCGAGCCGTACCGGGCCTCCGACCACGACCCGGTGGTGATCGG TATCGACCTGCGCCGGGTGGCGATGAAGAAGCACCGCAGGTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAGCGGATAGCGCCCGTGGCGTTGGTCGCCATGCAGAAAGGCCACCCTCGGGTGGCCTTTCTGCATGGCACGTGGGCCTGTAGGGCGAATAACCGCTTG CGGTTATCCGCCGTTGTGGCGGGATCTCGGCGGATAACGCCGGTGGCGTATTCGCCCCACGGAACGGAGCCCCCTCCAGGGTGGCCTTCCAGTGTGGCAC GTGGGCCTGGTAGG
Amino Acid Sequence
>extracelullar DNA degradation protein, EddB
MHPLRNAALLGGLALLGLPVANAAELIISEYVEGSGNNKALEFYNSGSQVLDLSAYRVEFYFNGASAAGRSIDLSGSLAPGKTFVLANGVADPALLALAS QRVEGSWFNGNDAVLLRRRGGEILDSLGQVGFNPGTTWGSGDVQTLDRSLVRKADIRDGDSDPSDAFDPAAQWLGYPRDTFANLGQHGAGEPGGGEEAGL RPIHEVQGAGAESPLVNQRVAIEGVVVGDFQNASELKGFYVQQEDATVDGDPATSEGIFVYDGGNGSDVKLGDRVRVTGQVREFNGLTELVGPLQVSVLA SGVALPTPAGISLPLASADALERYEGMRVQLRQTLTVNEVYNLGRYGEVLLSSGGRQMTPTNVVAPGEQAKAMQARNDLDRILLDDGRSGQNPDPIRYPA PELSAYNSLRVGDRTSAIDGVLDYSAGSYRIQPLQTPTFEAANPRPAQPAVEGRLRVASFNVLNYFNGDGKGGGFPTSRGANTAEEFQRQKAKIVAAILA SKADIVGLMEIENDGYGEFSAIADLVNGLNASLPQGQRYAFVNPNRAKLGSDEIAVGLIYRGDKVRTYRSAAVLDSSVNPEFDDTRNRPTLAQTFQEING GERLTIAVNHLKSKGSACDGDPDTGDGQGNCNLTRARAAQALVDWLAGDPTGAKEPDRLIIGDLNSYAKEDPVNVIRSAGYTDLVARQAGAGKGYSYVFS GQSGYLDHALANASLARQVRGAVEWHINADEPRVLDYNVEFKTPRQQDSLYNAEPYRASDHDPVVIGIDLRRVAMKKHRR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site