Strain | Pseudomonas aeruginosa strain AZPAE14379 AZPAE14379_contig_10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAAGAAAACACAGAAGAATGATTCACCGAGTCGATATAGGGCGAACATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACG ATTCGTCGCACCGCCGAAACACTGCTGAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATC CGAACATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAGTCCACCCCGGTGAT CATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTACCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTG GGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCGTTTCCTGATATCCGGCCGCATGGCCGTTGATGCTTATTTCGTGATGGGGATCCC
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DNA Sequence for Gene |
>NQ53_RS15355
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCAGGTACTCAAGGCCGAGAACG GCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCGTCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATT GACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATCGTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGAC TACCTGACCAAGCCGGTGGACGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCCGTCGCAGCGCGCCGCTCACCCTGACCCCGGAAAGACCAGGCCCCGCATGTCGGACGTTCAGACCCCCTTCCAGCTCCTCGTCGACATCGATCAGCG CTGCCGACGCCTGGCCGCCGGCCTGCCGGCCCAGCAGGAGGCGGTGCAGAGCTGGAGCGGGATCGGCTTCCGCATGGGCGGGCGGTTCTTCGTCGCCCCC ATGGGGGAGGTCGGCGAAGTCCTGCACGAACCGCGCTACACCCAGCTGCCGGGCGTGAAGACCTGGGTCAAGGGGGTGGCCAACGTACGTGGCCGCCTGC TGCCGATCATGGACCTCTGCGGTTTCCTCGGCACCGAACTGTCGCCCTTGCGCAAGCAGCGGCGGGTGCTGGTGGTGGAGCACCTGGACGTGTTCGCCGG CCTCATCGTCGATGAGGTGTTCGGCATGCAGCACTTCCCGGTGGACACCTTCAGCGAACAGCTGCCGCCACTAGAAGCGGCACTGCAACCCTTCATTCAT
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Amino Acid Sequence |
>protein PilH
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVIIVTTKDQETDKVWGKRQGARD YLTKPVDEETLLKTINAVLAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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