Strain | Pseudomonas aeruginosa strain AZPAE14379 AZPAE14379_contig_10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ATACCGCGCCGGCGCCACGGTTCTGGTTGAAGGCGTTGACCCGGAAACGCGCGACGCCCGGCACCTCGAAGGAGAAGTCGGTCTCGAGGAATTCCTCGAA GTCCTTGCGCTGCTTGTCGTTCATGATGTCGTAGATCAGCGCATGCACCTGCTTGTGTTCCAGCGGTGGCAGGTTGATCCGGCGTACATCGCCATCCACC CGGATCATGGGCGGCAGGCCGGCGGAGAGGTGCAGGTCCGAAGCGCCCTGTTTGGCACTGAAGGCGAGCAGCTCGGTAATATCCATGGGACTCCCCAATT ACAAGCAAGCAGGTAGAATGCCGCCAAAGCCGCCGTCTCGGACAAGGAAAACACCGGATGAACCAGGGTGCTTCCAGGACACGCGTGGTGTCCTGCGCCA GACGCGGAACCTCGACACTGGAACAGGAAGATGGCCATCGAGGCCGGCGGTTTCGAGGGCGTCTAGCCGACGCCGACCGCACTTCCATAGGGCGCAGGTA
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DNA Sequence for Gene |
>NQ53_RS15280
ATGTCCACGATAGCAGAGAATATTGCAAAGGTTGCCGCGCGCATCCGTGAGGCAGCGCAAGCTGCGGGGCGCGATCCGGCCACGGTCGGCCTGCTCGCCG TGAGCAAGACCAAGCCCGCCGCCGCGGTGCGCGAGGCGCACGCCGCCGGCCTTCGCGACTTCGGCGAAAACTACCTGCAGGAGGCCCTCGGCAAGCAGGC CGAACTGGCCGACCTGCCCTTGAACTGGCACTTCATCGGCCCCATCCAGTCGAACAAGACGCGGCCCATCGCCGAGCATTTCCAGTGGGTGCACTCGGTG GACCGGTTGAAGATCGCGCAGCGCCTGTCGGAGCAACGCCCGGCCGGGCTGCCGCCCCTGAATGTCTGCCTGCAGGTCAACGTCAGCGGCGAAGCCAGCA AGTCCGGCTGCGCCCCCGAGGACCTGCCGGCCCTGGCCGAGGCCGTGAAGCAACTGCCCAACCTCCGATTGCGTGGCCTGATGGCCATCCCCGAACCCAC CGCCGAACGCGCCGCGCAACACGCCGCGTTCGCCCGCCTGCGCGAACTGCTGCTGGACCTGAACCTTGGCCTGGACACCCTGTCCATGGGCATGAGCGAC GACCTCGAGGCAGCCATCGGCGAAGGTGCGACCTGGGTCCGCATCGGTACCGCCCTGTTCGGCGCCCGCGACTACGGCGCGCCGGCTTCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGGAATCCCCTATGAGCACACCCCGCATAGCGTTCATCGGCGCCGGCAACATGGCCGCCAGCCTGATCGGCGGCCTGCGCGCCCAAGGCGTGCCGGCGGC GCAGATCCGCGCCAGCGACCCGGGCGCCGAGCAACGCGCGAAGATCGCCGGCGAGTTCGCCATCGACGTGGTCGAGTCCAACGCCGAGGCCGTGGCCGAC GCCGACGTCGTGGTCCTGTCGGTCAAGCCGCAGGCCATGAAAGCCGTGTGCCAGGCCTTGGCGCCGGCGCTGAAGCCGGAGCAACTGATCGTCTCCATCG CCGCCGGCATCCCCTGCGCCAGCCTCGAAGCCTGGCTCGGCCAGCCGCGCCCGGTGGTCCGCTGCATGCCCAACACCCCGGCGCTGCTGCGCCAGGGCGC CAGCGGGCTGTACGCCAACGCGCAGGTCAGCGCCGCGCAACGCGAGCAGGCCGGGCAGTTGCTGTCTGCGGTAGGCATCGCCCTGTGGCTGGACGACGAA
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Amino Acid Sequence |
>hypothetical protein
MSTIAENIAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPIAEHFQWVHSV DRLKIAQRLSEQRPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQLPNLRLRGLMAIPEPTAERAAQHAAFARLRELLLDLNLGLDTLSMGMSD DLEAAIGEGATWVRIGTALFGARDYGAPAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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