Strain | Pseudomonas aeruginosa strain AZPAE14372 AZPAE14372_contig_9, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTGGAGCCGAAGACCGGCTTCATGCTCATCGACACCCTGCTCTCCGACGAGGAAGGCGCGTTCCTCGACGCCGTGCGCCACCTGATCCTGCCGGCCATCG TGCTGGGCACCATCCCGCTGGCGGTGATCGCCCGCATGACCCGCTCGGCGATGCTCGAGGTCCTGCGCGAGGACTACGTGCGCACCGCCCGCGCCAAGGG CTTGTCGCCGGCCCGGGTGGTCTTCGTGCACGCCCTGCGCAACGCGCTGATCCCGGTGCTGACGGTGTTAGGCCTGCAGGTCGGCACCCTGCTCGCCGGC GCGGTGCTGACCGAGACCATCTTCTCCTGGCCGGGCATCGGCAAGTGGCTGATCGACGCCATCAGCGCTCGCGACTACCCGGTGGTGCAGAACGGCATCC TGCTGGTCGCCACCCTGGTCATCCTGGTCAATTTCGTCGTGGACATCCTCTACGGCCTGGCCAACCCACGCATTCGCCACCAACGCTGAGGAGCGAGCCG
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DNA Sequence for Gene |
>NQ51_RS12250
ATGAACGCCATGCACAACGCTCCCGCCAGCGACCCGAGCCTGGTCTACCCGTCCCCGCTGAAGGAATTCTGGCAAGCCTTTACCCGGAACAAAGGTGCCG TCGGCGGCCTGCTGTTCATGCTGCTGATCGTGTTCTGCGCGCTGTTCGCCCCCTGGGTCGCGCCCTACGATCCGAGCGAACAATTCCGCGACTTCCTGCT GACCCCGCCGTCCTGGCTGGAGGGCGGCCAGGCGCGTTTCCTGCTCGGCACCGACGAACTGGGCCGCGACCTGCTCTCGCGGCTGATCCACGGCGCCCGC CTGTCGCTGCTGATCGGCCTGTCCTCGGTGGTGATCTCGCTGGTCCCCGGCATCCTCCTCGGCCTGCTCGCCGGCTTCTCGCCGAACCGTGCCGGACCGC TGATCATGCGCCTGATGGACATCATGCTGGCGCTGCCGTCGCTGCTGCTGGCGGTGGCCATCGTGGCGATCCTCGGCCCGGGCCTGATCAACACCGTGAT CGCCATCGCCATCGTCTCGCTGCCGGCCTACGTACGCCTGACCCGCGCCGCGGTGATGACCGAGCTAAACCGCGACTACGTCACCGCCTCGCGCCTGGCC GGCGCCGGCACCCTGCGACTGATGTTCGTCTGCGTGCTGCCGAACTGCATGGCGCCGCTGATCGTCCAGGCCACCCTGAGCTTCTCTTCGGCGATCCTCG ACGCCGCCGCCCTCGGCTTCCTCGGCCTCGGCGTGCAACCGCCGACCCCCGAGTGGGGCACCATGCTCGCCTCCGCCCGCGACTACATCGAGCGCGCCTG GTGGGTGGTCAGCCTGCCCGGCCTGACCATCCTGCTCAGCGTACTGGCGATCAACCTGATGGGCGACGGCCTGCGCGACGCCCTCGATCCGAAACTGAAG AACGCGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAGCACAACCATGAACAGCGCATCCGTATCCGCGCCACAGGAGACCGCCGCATGAGCCTCCTCGATATCAAGAACCTCAGCGTGCGCTTCGGCGACACC ACCGCCGTGCCCGTGGTCGACGGCCTCGACCTGAGCGTCGACAAGGGCGAGGTGCTGGCCATCGTCGGCGAGTCCGGCTCCGGCAAGTCGGTGACCATGA TGGCCCTGATGGGCCTGATCGACGCCCCCGGCTGGGTATCCGCCGATCACCTGCGCTTCGACGGCCACGACATGCTCACCCTCAAGGGCCGCCAGCGCCG GCGCATCGTCGGCAAGGACATGGCGATGGTATTCCAGGACCCGATGACCGCCCTCAACCCCAGCTACACCGTCGGCTACCAGATCGAGGAAGTCCTCCGC CTGCATCTCGGCCTGCGCGGCAAGGCCCTGCGCCAGCGCGCCCTGGAACTGCTCGAACGGGTCGAGATCCCGGCCGCCGCCAGCCGTCTCGACGCCTACC
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Amino Acid Sequence |
>ABC transporter permease
MNAMHNAPASDPSLVYPSPLKEFWQAFTRNKGAVGGLLFMLLIVFCALFAPWVAPYDPSEQFRDFLLTPPSWLEGGQARFLLGTDELGRDLLSRLIHGAR LSLLIGLSSVVISLVPGILLGLLAGFSPNRAGPLIMRLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPAYVRLTRAAVMTELNRDYVTASRLA GAGTLRLMFVCVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALDPKLK NAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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