Pseudomonas aeruginosa AZPAE14372, NQ51_RS12060
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14372 AZPAE14372_contig_9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCTAGCGCTGCGTCCTGCCTATGCTCCAGCCGCCAGACCGAACGGCGGGCGATAGTCGGACAGGCGCTTTGATCATGACCGCCACGGTCGCGATACGGAA TCGCGCTCAGCCGCTACTTCCGCCCCACTGTTTCCGCCGCTTCCGCAGCCGAGCCCGTTATCACCGGAGTTTTTTCCTACAGCAGTCCTCCCAGTCCCCT ACGAAAACCAAGAAGTTCTACCGGCCAACGCCAGAAAACTACGATTGTCGCCGTTTCAGCCTCGCCCCAGGCTATCGCCCACTCGATTCTCCGCCTTGAA ACCGATCGTTCTGCACATGCCTGCGGATATCGGCTTCTTTTCCCTGCAAGAACCGCGCTCCGGGCCGATTGACCATGCATCCAGCTTTTCCGCGTAACCA GGCTAGCCTTTCTTTCCCGCCGCCCTCCCCAAAGCCTTCCGGCAATTCCACTTCGATCGTTCCATCCCTCAGGGCCGGACCGTTGCTCCGTACGGGCCTC
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| DNA Sequence for Gene |
>NQ51_RS12060
ATGGGAATGGCCATGCTGTCGTCCTGCCTTGCCAGTGCCGCCCCGGATGCGGGGCAGGCGCTGCGTGACGTGGAAAGCCGACGCCTGAACCTGCCCGCGC CGGTGGAACTGGACGCCGAGCGCCCCAGCCCCGAGGACGGCGTATCACGGGCTGCCGAAGAGGGCGGCCCGACGGTGCTGGTCAAGCGCTTCCAACTCAG CGGCAACAGGCAGTTCGACGATCGACGCCTGCTGGCGCTCCTGCACGACCTGCCGGGCCAGGAACTCAATCTGAGCCAATTGCACGCCGCCGCCGCCCGC ATCGGCGATTTCTATCGGGAAAAGGGATATGTGCTGGCGCGCGCCTTCCTCCCGGCACAGGAAATCCAGGATGGAACGGTACGCATCGAAGTGCTCGAGG GACGCTACGGCAGGATCGAACTGCACAACACGTCCCGAACGCTGGACCGCGTTCTACTCCGCCCCTTGAGCGCACTCGAACGAGATACCGCGGTCCAGGG CTCCGAGCTGGAGCGTGCGCTTCTGCTCCTGAGCGACATTCCCGGCCTCCAGGCCAAAGGCACCCTGCTGCCGGGCCAGGCGCAGGGAACCACGGACTTG CGCGTCGAGGCCCGCCCCGGCCCGCTGGTCGGCGGCAGGCTGGAGGCAGACAACCATGGCGGCCGCTACATGGGGGAATATCGCCTGGGAACCACCCTCG ACTTCAACAGCCCGCTGCGACTGGGCGACCAGGCGAGACTGAGCCTGCTGGGCAGCGATCGGCACCAACGCTACTACCGTGCAGCCTATCAACTGCCCCT TGGTTCCCGAGGCACGCGCATCGGACTGGCCCACGCCGAGACGACCTATCGACTGGTACGCGACTTCTCGCGCCTGGACGCCCATGGCCGGGCCATTACC GACAGTCTGTTCGTCAGCCAGCCCCTGCTGCGTAGCCGCAGCTTAAGCCTGTCCACCCAGTTGCAATATGAAAACAAGCGACTTCGCGATGACCAGGAGC GTACCGGGAGGCATAGCCGCAAGGAGATCCGCCTGTGGACCGCCAGCATCAGCGGAAACGCCCAGGACCGCTTGTTCGGCGGTGGACAGAGCGGCTTCTC GCTGGCCTATGCCCACGGCCAGCTCGCCATCGACTCCGCCGAAGAGCGGCTGCTGGACCGCTACACCATCGGTACCGCCGGCAGCTTCGACAAGATCATG CTCAACGCCGTACGCCTGCAGCACCTGGGCGACCGCCTGCAGTTGTTCGCCCAACTCAACGCCCAGTGGAGCGGCGGCAACCTCGACAGCGCGGAACAGT TCGACATGGGCGGCCCCTACGGCGTTCGGGCGTTCCCCCTGGGCAGCTACAAGGGCTACGGCGACGAAGGCTGGCAAGCCAGTGCGGAGCTGCGCTACAG CCTGGCTCCGGGCTGGCAGCTGAGTTCGTTCGTCGACCAGGGCGCGGTGAAATTCCTCAAGCACCCCAATACCACGGAAGGCAATCGCAACCGCATGGCC GCCGTCGGCAGCGGCGCAACCTGGTACGGAACGGATCACCAGGTCAGCCTGACCGCCGCCTGGCCCCTGAGCCAGGAAAACAACATCGAGCCCAAGCGCA CTCCCCGGCTGTGGTTGCAAGCGACCCGCTACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCAAGCTCCCGCCCGCCATGCCGGCGGGCCCCACTGAAAGGAAAAGCCATGAACAAGAGCTATACGCTGGTCTGGAACCAGGCCACAGGCTGTTGGAACG TCGCAAGCGAAGGTACCCGTCGGCGCAGCAAGAGCGGACGCGGCAAGGCGCTCGTAGTCGCCGGAGCGTCACTGCTCGGCCTGTTCTGCCAGGCCCCCGC CTTCGCCCTGCCCAGCGGCGCCACGGTCGTTTCAGGCGATGCCGGATTCCAGACATCCACCGATGGCCGGCATATGGTCATCGACCAGCAGAGCCACAAG CTGATCACTAATTGGAACGAGTTCAGCGTCCGTGCCGATGAGCGGGTCAGCTTCCACCAGCCGGGCCAGGACGCCGTCGCCCTGAACCGGGTGATCGGCC GCAACGGCAGCGATATCCAGGGGCGGATAGATGCCAACGGCAAGGTCTTCCTGGTCAATCCCAACGGCGTGGTCTTCGGCAAGTCCGCCCAGGTCAACGT
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| Amino Acid Sequence |
>membrane protein
MGMAMLSSCLASAAPDAGQALRDVESRRLNLPAPVELDAERPSPEDGVSRAAEEGGPTVLVKRFQLSGNRQFDDRRLLALLHDLPGQELNLSQLHAAAAR IGDFYREKGYVLARAFLPAQEIQDGTVRIEVLEGRYGRIELHNTSRTLDRVLLRPLSALERDTAVQGSELERALLLLSDIPGLQAKGTLLPGQAQGTTDL RVEARPGPLVGGRLEADNHGGRYMGEYRLGTTLDFNSPLRLGDQARLSLLGSDRHQRYYRAAYQLPLGSRGTRIGLAHAETTYRLVRDFSRLDAHGRAIT DSLFVSQPLLRSRSLSLSTQLQYENKRLRDDQERTGRHSRKEIRLWTASISGNAQDRLFGGGQSGFSLAYAHGQLAIDSAEERLLDRYTIGTAGSFDKIM LNAVRLQHLGDRLQLFAQLNAQWSGGNLDSAEQFDMGGPYGVRAFPLGSYKGYGDEGWQASAELRYSLAPGWQLSSFVDQGAVKFLKHPNTTEGNRNRMA AVGSGATWYGTDHQVSLTAAWPLSQENNIEPKRTPRLWLQATRYF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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