Pseudomonas aeruginosa AZPAE14372, NQ51_RS28670
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14372 AZPAE14372_contig_39, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGCACAAGCTCGCCGGACTGCTGGGCAACCTGCTGGGAAGCCTGGACGAGCAGTTGCCGCTGCTGGCCGAAGCCCTGGACCAGGTGGACCTGGCCGA GGCGGCGAACATCGCCCATCGCCTGTCCGGAAGCTGCCACTCCATGGGTCTGGTGGCGCTCGGCGCCGGCCTGGGCGAGCTGGAGCGCGAGGTCCTGGGC GCGGCCGGGGTCGACCCGCGAGCCTGGGGCGCACGCCTGGGTAGCCTGCGCCGCGACGGCGCCGAAGCCCTGCGCCGCGCCGGCTTCCTCGGCGAAGCCG ACGCAGCGGCCGGTTGAGCGGCGCGGCGAACAACTTCCTTACAGCTTTTTACATCTTCGATCCGCGCGTTCAACGGCGTCTTACATCCGCCGCCAATAAT CCGCTCATCCGTGCGCAAGACACGGCCTCTGACAGAGTGGAGACAAGAATAATGAGCCATCTCGAAGACCCCTGCGCGTACCCTCATCCGGAGGTGCGCC
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| DNA Sequence for Gene |
>NQ51_RS28670
ATGGCTGACGGCAAGGAAAGGCTGCAACTCACCCGGGCCCTGGCGAGCCGCCACATCTTCATGCTGTCCCTCGGCGGGGTGATCGGCACCGGGCTGTTCA TGGGCTCCGGCGTGACCATCAACCAGGGCGGCCCGGCCGGCGCGGTGCTGGCCTACCTGGTGGCCGGGGTGCTGATGTACCTGGTGATGGTCTGCCTCGG CGAGCTGTCGGTGCAGATGCCGGTCTCCGGTTCGTTCCAGGCCCACGCGACGCGTTTCATCGGCCCGGCGACCGGCTTCATGATCGGCTGGGTCTACTGG ATGAGCTGGGCCTCCACGGTAGGCCTGGAATTCACCGCGGCCGGGATGCTCATGACCCGCTGGTTCCCGGAGGTGCCCGTGTGGCTATGGTCGGGTTTCT TCGTGGTTGTGCTGTTCTCCCTCAATGCCCTGGCGACCCGCGCCTTCGGCGAGGCCGAGTACTGGTTCGCCGGGATCAAGGTGGCGGCGATCCTGGTGTT CATCGTGGTCGGGGGACTGGTGATCTTCGGCGGTATCGAACTGAAGAGCGGTGCGCCGGCGCCGATGTTCTCCAACCTGGTCGGCGAGCGGCTGTTCCCC AACGGCCTGTCGGCGGTGTTCGCGGTGATGATGACGGTGGTCTATGCCTTCCAGGGTTGCGAGATCATGGGCGTCGCCGCCGGCGAGACCGAGCGACCGG AGAAGAGCATCCCGCGGGCGGTGCGCAACGTGGTGTTCCGCGTACTGATCTTCTACGTGCTGGCCATCGTCGTGCTTTCCGCCATCATTCCCTGGCAACA GGCCGGGCTGATGGAAAGCCCGTTCGTGCAGGTGTTCGACATGGTCGGGATTCCCTACGCGGCGGACCTGATGAACTTCGTCATCCTCACCGCCATCCTC TCGGTAGGCAACTCGGGCCTGTACGCCTCGACGCGGATCCTCTGGGCGATGTCCAGGACCGGCATGGCCCCGCGCGGCCTGTCGAAGCTCAGCGCGCGCG GCGTGCCGCTCTACGCGTTGCTGATCACCCTGTGCTTCGCCCTGCTCTCGTTGCTGACCAGCGTGGTCGCAGCCGACACCCTGTTCATGGTGCTGATGGC GGTGAGCGGGATGTCCGGCACCGTCACCTGGATCGTCATCGCCTACGCCCAATACCGCTTCCGCCGCGAGCACATGGCCAGCGGCGGCACGGTCGCCGAG CTGAAATATGCCGCGCCGCTGTTCCCGCTGGTGCCGCTGGCCTGCATCGCCGTGTGCTGCTCGCTGTTCGTCTTCCTCGCCCTCGATCCCACCCAGCGGC CGTCCTTGTACTGGGGCTTCGGCTTCATCGCCGCCTGCTACCTGGCCTATTACGTGGTTCGTCGCCGGCAGCCGCAGGGACTGGGCGACCCCGCCCTGGG ACGGGCCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGGCCATTCGCAGGACCCGACGCCCGCCGCATCCGGCGGGCGTTTTCGTTTTCGCCTGGTTGGTTTGTTCGAAGTTGTAACAGCCGGCTCGCGCGGGCC TCCGCCGCTTTTCGGCGGATCGCATGGCGTGTGGCTTTGCGCCTGCCGCAGGGCCGTTACATACACCCGAATGGGTGGATTGTGGTCTTGTTGAACGAGT GTTTAGTATTGCCTGAAAGCCGCGATCGCCATCAACCAACAATAAGAACGAGGGCCGCATGACTGACCTTTCCCCATTGCAGACGCGGGTCGAAGCCGGG ATCGCCTGGCTCGTCCTGAATCGTCCGCAACAGCGCAATGCACTGGATATCCCCACCCTGGAGGCCCTGCACGTCCGACTCGATGCCTGCGAGCGCGACC CGGCAGTGCGCGCTGTGGTGCTCGGCGGCAGCGGACGCAGCTTCTGCGCCGGGGCCGATCTCGCCGAATGGGCGGCGGCTGAAGCCCGTGGCGAGCTGGA
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| Amino Acid Sequence |
>amino acid permease
MADGKERLQLTRALASRHIFMLSLGGVIGTGLFMGSGVTINQGGPAGAVLAYLVAGVLMYLVMVCLGELSVQMPVSGSFQAHATRFIGPATGFMIGWVYW MSWASTVGLEFTAAGMLMTRWFPEVPVWLWSGFFVVVLFSLNALATRAFGEAEYWFAGIKVAAILVFIVVGGLVIFGGIELKSGAPAPMFSNLVGERLFP NGLSAVFAVMMTVVYAFQGCEIMGVAAGETERPEKSIPRAVRNVVFRVLIFYVLAIVVLSAIIPWQQAGLMESPFVQVFDMVGIPYAADLMNFVILTAIL SVGNSGLYASTRILWAMSRTGMAPRGLSKLSARGVPLYALLITLCFALLSLLTSVVAADTLFMVLMAVSGMSGTVTWIVIAYAQYRFRREHMASGGTVAE LKYAAPLFPLVPLACIAVCCSLFVFLALDPTQRPSLYWGFGFIAACYLAYYVVRRRQPQGLGDPALGRAG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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