Pseudomonas aeruginosa AZPAE14372, NQ51_RS26505
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0019867 | outer membrane |
Inferred from Sequence Model
Term mapped from: InterPro:SM00965
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR47234 | - | - | - | 341 | 882 | 0.0 |
| Pfam | PF07715 | TonB-dependent Receptor Plug Domain | IPR012910 | TonB-dependent receptor, plug domain | 147 | 265 | 8.3E-20 |
| SMART | SM00965 | STN_2 | IPR011662 | Secretin/TonB, short N-terminal domain | 65 | 116 | 1.0E-8 |
| FunFam | G3DSA:3.55.50.30:FF:000002 | Probable TonB-dependent receptor | - | - | 36 | 144 | 8.5E-30 |
| CDD | cd01347 | ligand_gated_channel | - | - | 153 | 882 | 1.6065E-70 |
| Gene3D | G3DSA:2.170.130.10 | - | IPR037066 | TonB-dependent receptor, plug domain superfamily | 146 | 274 | 3.5E-26 |
| SUPERFAMILY | SSF56935 | Porins | - | - | 126 | 882 | 1.68E-96 |
| Gene3D | G3DSA:2.40.170.20 | - | IPR036942 | TonB-dependent receptor-like, beta-barrel domain superfamily | 281 | 882 | 1.5E-57 |
| FunFam | G3DSA:2.40.170.20:FF:000043 | Uncharacterized protein | - | - | 282 | 882 | 0.0 |
| Pfam | PF00593 | TonB dependent receptor | IPR000531 | TonB-dependent receptor-like, beta-barrel | 363 | 875 | 9.8E-43 |
| Gene3D | G3DSA:3.55.50.30 | - | - | - | 37 | 144 | 1.4E-23 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.