Pseudomonas aeruginosa AZPAE14372, NQ51_RS20680

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14372 AZPAE14372_contig_23, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAAGGCTACAGCCATGTGCTCAACGGGCGCTTCAAGGGCGGCCACATCACCCGCCACTACGGCCAGCCGGAGCAGCACGTCCATGCCGTCCAGTTGGAGC TGGCGCAGTGCACCTACATGGACGAGCAGGCCCCGTTCGCTTACCGCGCGGACCTCGCCGAAGCGACCCGCGCGGTCATCCGCGAACTGCTGGAAAGCCT CCTCGCCTGGGGGCACGAGCGCTACGCCTGAGGCGCTCGGAGGCGGCGGACGCCTGGCCGTCCTGGCGGACGTGAATGCCGCGGATGGGGTGGGGCGTCC GCGTCGGCATTCTGGAAATTTTATGTTACAAATTTATTGAGGTCAGCGTTGATGCGGCCGGGAGGCCGAGTGCGCAAAGAGTTGCACAACTGTTCTCCTC TATCCTCTCGGCCAGCATTTCCATCGCGCGGGCGCAGGCGCGTCGCGCCCGGAACCGAATACGCCAGGAACGCACGGCTGCGTTTCCAAGAGGACAGTGA
DNA Sequence for Gene
>NQ51_RS20680
ATGTTCGCCCCCGCCAACCAGACGCACTTCAGCCTTCGCATCGAAAACCTCCGGCACGACTTCCAGGTACTCGCCTTCCGCGGTCGCGAAGCCATCAGCC AGTCCTTTCGCTTCGACCTGGAGCTGGTCAGCGAGCGATCCGATCTGGACCTCGACGCGCTGCTGCACCAGCCGGCCTTCCTGATCCTTTCGCCGAGCGG GCAAGGGGTCCACGGACAGCTCACCAGCATCGCCCAGGGGGACTCCGGCAAGCGCCTGACCGGCTATCGCGCGACCCTGGAGCCGCGCCTGGCCTACCTG GGGCTGTGCAGCGACCAACGCATCTTCCAGCGCCTCAGCGTGCCGGAAATCATCGGTCGGGTGCTGGAGGGCCACGGCATTCTCGCCGACGCCTACCGCT TCCAGCTGGGCCCGACGCCGTACCCGGCCCGCGAATACTGCACGCAGTACGACGAAACCGACCTGGCGTTCCTCAGCAGGCTCTGCGAGGAGGAAGGCAT CCATTACCACCATGAGTTTTCTGCCCGGGGCCATATGCTGGTCTTCGGCGACGACCAGACCTCCTTTCCGCGGCTGCAACGCCCCGTCGCCTACGTGCAG GACGCCGGGCTGGTCGCCGACCAGCCGGTGGTCAAGCGCTTCGGCGTGCGCTTCGACACCCGTGCCAGCCGGGTTACCCGGCGCGACTACGACTTCGAGC AACCCGCGTTGCAGATGCAGGCCGCCCATGGCCCGCAGCCCGGGGCGCAGCAACCGGACCTGGAGGACTACGACTATCCCGGCCGCTTCACCCACCGCGA GCGCGGCAAGCACCTGAGCCGGCGCGCGCTGGAACGGCATCGCGCCGACTACCTACAGGCCAGGGGCGAAAGCGACGAACCGGCGCTGCTCAGCGGACAC TTCCTGACGCTGTCCGCGCATCCCCGCGGCGAATGGAACGATCTCTGGCTGCTTACCGAGGTTCTCCACGAAGGGCGGCAGCCGCAGGTACTGGAAGAGT CGATCGACAGCGACGTCGCGCAGGGCCGGGGCGATTTCCGCCAGGGCTATCGCAACCGTTTCGTCGCCACTCCCTGGAGCGCGCATTACCGCCCCCCGCT GGAGCATCCCAAGCCACACGTGCTGGGCTGCCAGACAGCGGTCGTGACCGGCCCCGCCGGCGAGACCATTCACTGCGACCAATACGGCCGGGTCAAGGTG CAGTTCTTCTGGGATCGCCTCGGCCAGGCCGACGACAACACCAGTTGCTGGTTGCGCGTCGCCTCCAACTGGGCGGGCAAACGCTATGGCGGCGTCGCCA TCCCGCGGGTGGGCATGGAAGTCCTGGTGGGTTTCCTGGAGGGCGATCCGGATCAGCCGCTGGTCACCGGCTGCCTCTACCACAGCGAAAACCGGGTGCC CTACGAACTGCCGCAGAACAAGACCCGCAGCGTTTTCAAGACCGACAGCTACCCCGGCGGCGGCGGTTTCAACGAACTGCGCATCGAGGACCGCAAGGGC CAGGAACAGATCTTCGTCCACGCCCAGCGCGACTGGGACGAGAACATCGAGCACGACCAGAAGATCCGCGTCGGCCATGAGCGCCACGACACGGTCGAGG GCGATAGCTACAGCGAGTTCAGGGCCGAGGAACAGCGCACGGTCCACGCCGACCGCAAGGTCGAACTGAAGGCGGCCGACCACCTCAGCGTCGCCGACGC GTTGCACCTGAGGATCGGCACCGGCCAGTTCGTCGAGGCGGGCGACGAGATCCATTTCAAGGCCGGCGACAAGGTAGTGATCGAGGCAGGCATGGAGCTG ACCCTAAAGGGCGGTGGCAGCTTCGCCAGGCTCGACCCGGGCGGTGTCACCCTTGACGGCGCCCAGGTGATGATCAACAGCGGCGGCAGCCCCGGCATCG GTAGCGGCGTTCGCGCGCTGTCGCCGCTGCAACCGCTCGCGGCCGACTCCGCGGCGGCGGGAGGCGCCTTGTTGGGAGCCATCGCCCAGAAGATCGGCGA AGCGCCGCAGAAACTCCTGCGTTTCGAACTCAGTCCGTTGCCCGGCGTGGCATCGGCGGCCAGGCAACCGTATCGGCTCTACGCCAACGGTGCCCTCAAG GAGGAGGGCATCGCCGACGAAGGCGGCGCAATCAGCTTCGAACCGCTTCCGGGCGAACGCACCTATCGTATCGAGACGGCCAATGGCCACGCCTACGAAG TGGAGATGGTCGACCAGCCGGACGCACTGCAGGCCGACGATCGGCTCGCCCAGCAGGGGTTCCGCGACTACCGGGCGGAAATGCCCCAGCACAAGCCGCG TTCCGCCCCGGACGCCTACCGGCGCGACGCCTCGCGGCCCGGCGCCGCCGACAAGGATGACCCCACGCCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGACCTGTACAAACCGCAGACCCTCAAGCTGTACGCGCAACAGGCCGGCAGCGTCCGGCTGACCCTCGACTGGTTCGCCAACAAGGCTTTCTACCCGCC GCGCGCGGGTGTGCACATCAAGCCGCTGATCAATGGCCAGGCGGCCTTCGACGCGGTGCATGCGGCGATGGAAGCGGCCCGGCACAGCATCGACATCATC ACCTGGGGCTTCGACCCGGCCATGCGTTTCAAACGCCCCGACGGACCGCGAATCGGCGAATTGCTGCAGACGAAGGGCCGCGAAGGGGTGCAGGCGCGGG TGCTGGTCTGGAGCAACCAGCTCGCCAGGCTCAAGGAAAACACCATCCCCGGGGCCGGCGTCGGCGGTTCCGGCGGCACCTGGGCGGGCTCGGGCGTCGC CAGCGGCAGCGCAGTGGACAACGAGGTGCTGCGGCTGGAGCAGCGGCGCCAGCATAACCTCAACCTCATCGCGCGGCAGCAGGAAGCCCTGGAACGCTCG
Amino Acid Sequence
>type IV secretion protein Rhs
MFAPANQTHFSLRIENLRHDFQVLAFRGREAISQSFRFDLELVSERSDLDLDALLHQPAFLILSPSGQGVHGQLTSIAQGDSGKRLTGYRATLEPRLAYL GLCSDQRIFQRLSVPEIIGRVLEGHGILADAYRFQLGPTPYPAREYCTQYDETDLAFLSRLCEEEGIHYHHEFSARGHMLVFGDDQTSFPRLQRPVAYVQ DAGLVADQPVVKRFGVRFDTRASRVTRRDYDFEQPALQMQAAHGPQPGAQQPDLEDYDYPGRFTHRERGKHLSRRALERHRADYLQARGESDEPALLSGH FLTLSAHPRGEWNDLWLLTEVLHEGRQPQVLEESIDSDVAQGRGDFRQGYRNRFVATPWSAHYRPPLEHPKPHVLGCQTAVVTGPAGETIHCDQYGRVKV QFFWDRLGQADDNTSCWLRVASNWAGKRYGGVAIPRVGMEVLVGFLEGDPDQPLVTGCLYHSENRVPYELPQNKTRSVFKTDSYPGGGGFNELRIEDRKG QEQIFVHAQRDWDENIEHDQKIRVGHERHDTVEGDSYSEFRAEEQRTVHADRKVELKAADHLSVADALHLRIGTGQFVEAGDEIHFKAGDKVVIEAGMEL TLKGGGSFARLDPGGVTLDGAQVMINSGGSPGIGSGVRALSPLQPLAADSAAAGGALLGAIAQKIGEAPQKLLRFELSPLPGVASAARQPYRLYANGALK EEGIADEGGAISFEPLPGERTYRIETANGHAYEVEMVDQPDALQADDRLAQQGFRDYRAEMPQHKPRSAPDAYRRDASRPGAADKDDPTP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site