Strain | Pseudomonas aeruginosa strain AZPAE14372 AZPAE14372_contig_21, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGGCCTTCTACGGCATGTCCACCTTCGAAGGCCCGATGATGGCGATCAAGACCGTCAACGCCCTCTCCCACTACACCGACTGGACCATCGGCCACGTGC ACGCCGGCGCCCTCGGCTGGGTGGCGATGATCTCCATCGGCTCGCTCTACCACCTGATCCCGAAAGTCTTCGGCCGTCCGCAGATGCACAGCATCGGTCT GATCAACGCGCACTTCTGGCTGGCCACCATCGGCACCGTGCTGTACATCGCCTCGATGTGGGTCAACGGCATCACCCAGGGTCTGATGTGGCGCGCGGTC AACGAGGACGGCACCCTGACCTACTCCTTCGTTGAAGCACTGGTCGCAAGCCACCCGGGCTTCATCGTGCGCATGATCGGCGGTGGTTTCTTCCTCACCG GCATGCTGCTGATGGCCTACAACACCTGGCGCACCGTGCGTGCTGCCAAGCCGGCCGAATACGAAGCCGCCGCGCAGATCGCCTGAGGAGCCCGACGTAA
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DNA Sequence for Gene |
>NQ51_RS20055
ATGAAGAACCACGAAATACTCGAGAAGAACGTCGGCCTGCTGGCCATCTTCATGGTGATCGCCGTCAGCATCGGCGGCCTGACCCAGATCGTTCCGCTGT TCTTCCAGGACGTGACCAATACCCCGGTCGAAGGCATGAAGCCGCGTACCGCCCTGGAACTGGAAGGTCGCGACATCTACATCCGCGAAGGCTGCGTCGG CTGCCACTCGCAGATGGTCCGCCCGTTCCGTGCCGAGACCGAACGCTACGGCCATTACTCGGTCGCCGGTGAAAGCGTCTGGGACCACCCGTTCCTGTGG GGTTCCAAGCGTACCGGCCCGGACCTGGCCCGCGTCGGCGGCCGTTACTCCGACGACTGGCACCGCGCGCACCTGTACAACCCGCGCAACGTGGTGCCCG AGTCGAAGATGCCTGCCTACCCGTGGCTGGTAGAGAACAAGCTTGATGGCAAGGACACCGCCACCAAGATGGAAGTCCTGCGCAAGCTGGGCGTGCCTTA CACCGACGAGGACATCGCCGGTGCACGTGAAGCCGTGAAGGGCAAGACCGAGATGGACGCCCTGGTGGCGTTCCTTCAAGGCCTGGGAACCTCTATCAAG AGCAAACGGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GTGTGATGGATATCGGGACTCTGCGTGGACTGGGCACCGTGGTGATCATGGTCGCCTTCATCGGCCTGGTGATCTGGGCCTATAGCGGCAAGCGCAAGAA GAGCTTCGACGAAGCGACGATGCTGCCCTTCGCAGACGATCCCGAAGCCAAAAAGCACGTCGAGCAAGCTTCTAGGAGTAACAAAGAATGACGACCTTCT GGAGTCTGTACATTACAGCTCTCACCCTCGGCACCCTGCTGGCGCTGACCTGGCTGATCTTCGCCACCCGCAAGGGCCAGCGCAGCAGCACCACCGACGA GACCGTGGGCCACTCCTACGACGGCATCGAGGAGTACGACAACCCGCTGCCGAAGTGGTGGTTCATGCTGTTCGTCGGCACCCTGGTGTTCGCCGTGGGC TACCTGGCCCTGTACCCGGGCCTGGGCACCTGGAAAGGCCTGATGCCGGGCTACCAGTCCGCCGACGAATTCGCCGACAAGGAAAAAGGCTGGACCGGCG
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Amino Acid Sequence |
>cbb3-type cytochrome C oxidase subunit II
MKNHEILEKNVGLLAIFMVIAVSIGGLTQIVPLFFQDVTNTPVEGMKPRTALELEGRDIYIREGCVGCHSQMVRPFRAETERYGHYSVAGESVWDHPFLW GSKRTGPDLARVGGRYSDDWHRAHLYNPRNVVPESKMPAYPWLVENKLDGKDTATKMEVLRKLGVPYTDEDIAGAREAVKGKTEMDALVAFLQGLGTSIK SKR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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