Pseudomonas aeruginosa AZPAE14372, NQ51_RS19290

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14372 AZPAE14372_contig_20, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACCCAACGTGGTGGCCGATCCGCCGAAGAAGCCGGACAGCAAGTACGGCAGCCGCCCCATCTGATTTCGCGTCATCCCAAGGCCCGCCACCCGTGAGGGA GTGGCGGGCCTTGTGCTATGGCGCCTGCTATCTTGGCGGGCATCTCGCCCCGCCGCATCCCGGTTGGCGAGCCGATCTTTCGCCTGTTCAGGCACGGCTG GCGACGGGCCAAGGCCTTTTCCTTTCCGGTGGCAGCGCTACCGTTCCACATCGTCAACCGAAGCTGCTTGCCATCCAGGCGCTCCAAGCGGCGTCCGGGG CCGATCCTGCACTTGCCGGAGAGCGAGCTGTAGAGCTTGCTTAAGAATTTTCCTAGCGATTCTTAGGTGGATTCGCGGAGCCGTGTAGGTCCTGTCTTAT GGCTCTTTTCCAGGCGTTCTGAAAAGATTCGCCACCCATCAAGTTCGCGCCGGTTCCGCCGGTTTTTCCCGGACATGCCGGACACATCGGTTGTCATCCC
DNA Sequence for Gene
>NQ51_RS19290
ATGGAGTTCAAGACGTTCCGTCGAACCCTGCTGATCGCGGCAGTCCTGTTCGTTCCCGCCGGCACCAGCATGGCTGCCAATCTGTACGCTTTCGGCGGCC GCGATATCGCCGTCCCCTCGATCCTTCCCGAGGGAAACGTCACGTCGCGCTACACGTTCACTCCCATGCAACTGTGCGGCAAGCCCAGCTGCGATCTCAT CGGCGTCTCTCTGTACAACAAGGGAAGTGTCTGGGACCCGGTCGATGGTCCGGACCTGAATACCAACGTGCCGGGCCTTTCGGTGCGCCTGCTGCTGGAT GGCATACCGGCGAGCAGCCGTTTCAAGGGCACTTTCTCGCAAATCGCGGAGGTCCAGTTGTTCCGCAACTCGACGCCGCTCTCCGACGGCCAGTTCGCGA GCGGAGCGTTCAACTCGTACTTCCTCATTACCTACAAGGACGGGCTTGTCGCGTCTGGCACCTCTTCCGTCAGGTTGACCGGGAGCGTCACCACGATCAA TGCGACCTGCCAGGTCGCCGACCAGACCGTGAAGCTGCAGTCGATCGCTGCCGCCCGGCTGAACGGCGTCGGCACCTACGCGGCCGTTACCCCGTTCAAT CTCGTAGTGGCCGGCTGTCCTCGCGGGTACAACCGCGTCGGCTACAGCCTTCAAGCGGTGGGGGGGGCGGTGGCCGAAGGCTCGGGTGTGCTGCCGCGCC TGGCGGGCAGCACCGCGACCGGCGTATCGATCCGGGTCACCGACGAGGCCGGCGTGCCGCTACGGATGGGACTCTCGTTGCCGGTGACCGCGTACGACAA GAACACCGGCGGGGCGTACTGGATCCCGATGAAAGCGTCCTATGTGCAGACCGCCGAGAAAATCACGCCCGGCTCGGTCCTGGCCGCGATGGTGATCCTG CTCGACTACCAGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGCAGGGGAGGGCAAGAGCGCGCCTCACCCGAACGCCTCGAAGAACGCCAGGGCGCGCGGGTCGCTGGCATAGGCGATGTTGATACGCAGCCAGTCGCTC TCCTCGCCTTCCGGGCTGAAGCCGCTGCCCGGCGACAGCAGCACGTCCAGGCGTGTCGCCACGGCCTGCACTTCGGCGAACGGGTAGTCGCCGATACGGG CCCAGACGAACATCCCGCCGACCGGTTCGGCGAACACCTCCCAGCCGTTGTCCCCAAGCACCCGCAGGGTCGCCGCCATCTGCCGGGTCAGGCGCTGGCG CAGGCGTTGCACCAGCTTGCGGTAACTGCCGTTGGCGAGCATGGTCGAGACCACGCATTCGGCGAAGCGCTGGCTGCCGATGCTGGTGTACATCTTCACA TCCGCCAGGCGCCGGATCAGCTCGGGGCCGGCGATCAGGTAGCCGACCCGTAGCGAGCAACTGAGGGTCTTCGAAAAGCTCGCCAGGTAGATCACCCGGC
Amino Acid Sequence
>fimbrial protein
MEFKTFRRTLLIAAVLFVPAGTSMAANLYAFGGRDIAVPSILPEGNVTSRYTFTPMQLCGKPSCDLIGVSLYNKGSVWDPVDGPDLNTNVPGLSVRLLLD GIPASSRFKGTFSQIAEVQLFRNSTPLSDGQFASGAFNSYFLITYKDGLVASGTSSVRLTGSVTTINATCQVADQTVKLQSIAAARLNGVGTYAAVTPFN LVVAGCPRGYNRVGYSLQAVGGAVAEGSGVLPRLAGSTATGVSIRVTDEAGVPLRMGLSLPVTAYDKNTGGAYWIPMKASYVQTAEKITPGSVLAAMVIL LDYQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site