Strain | Pseudomonas aeruginosa strain AZPAE14372 AZPAE14372_contig_18, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGAGCCCTGCCAGAAGGCCGTGGTCGCCGCCGAGGTGATGGTGATGCCGCGCTCCTGCTCCTGGACCATCCAGTCCATGGTCGCCGCGCCGTCATGGACC TCGCCCATCTTGTGGTTGACGCCGGTGTAGAAGAGGATCCGCTCGGTCGTCGTGGTCTTGCCGGCGTCGACGTGGGCGACGATGCCGATGTTGCGATAAA GCTCGATGGGAGTGGTGCGAGCCATGATCTGCCCCTTGGGTGCTGCCCTGGATGATGGGAACGACTGCTGAAAGAAAAATGTAGCTGAAGAAAGGACGCC ACAGCACCGCCGCGACGCCTGCTTTTCGACCTCGGCAGAGGGGACTGGTTCTGCCGCTCCGGCCCGCCGATGAAAGGCGCAACGGCAGGGCTTGTTCCCA GCGGACATAAACTCATGGCGCAAAGGTCTAAGCCGTCCCTGGAAAATCCCCCGGCTCGACGGACATCCCTGGACACACCGGAACAAGGGATGCCCCGACC
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DNA Sequence for Gene |
>NQ51_RS18495
ATGCACCGATCGCTCCACACCGACCCGCCGCTGGGCGCCGCCCTGCTGCTGGCCCTGCAGCTCGCTCCCAGCAGCGCCGCCGCGGCGGAGGGACAGGCGC CTGTCGACCCGCCCACGGTCCAGTTGCAACGAATCGAGGTGACCGGTAGCGCGATCCGCCGGGTCGATGCGGAAACCGCGGTGCCGATCAGCGTCCTGCG CGCCGAGGAGCTGCGCCAACAGGGCGTGACCAGCACCGAGGAACTGATCGGCCGGCTTTCCGGCAACCAGGGCGTATACAACTCCAGTCGCTCGGTCGGC AGCGCCACCGGCGGCGCCTCGTTCGCCGACCTGCGCGGGATCGGCGCGAACAAGACCCTGGTGCTGCTCAACGGCCGGCGTCTGGCGAACAATGCCATCG ACGGCTCCGCCGTGGATCTCAACACCATTCCCTTCGCCGCCATCGACCGGGTCGAGGTGCTGCGCGACGGCGCCTCCGCACTGTACGGCACCGATGCCAT CGGCGGGGTGATCAACTTCATCACCCGCAAGAGCCTGAACGAAGGCCGCGTCGACAGCGGCTACGCCTCCCCCACCCAGGACGGCGGCGGCAACCAGCGC AACGTCAGCGCTAGCTGGGGCTTCGGCGAGCTGGAGGAGGATCGCTTCAATGTCTTCGCGGTGGCCAACTACGACAAGCAGGAACGCCTCGGCGCCAAGG ACCGCGGCTACACCTACAACTACCAGCCGGGACGCGGCCTCGACTACAGCTCCGGCACCGCCTTCCCCGGCAACTGGAGCCAGGGCGCCAACGCCAGCAA TCCGCTGGCCGCCGGCGGTTGCAAGGGCGCCGACCTGATCCCGCGCAACGGCATCTGCCGGCAGAGCCTGTGGCGCTACCTCGACCTGGTGCCGGAAACC GAGAAGACCTCGGTGTTCAGCCGCGCCACCGGCAAGCTGGCCGACGAGCACAACGTCAGCCTGGAGTACTTCTGGTCGCGCAACGACAACGCTACCCAGG TCGGCCCAGGGACCCTCACCGGCCTGCAGATCGATCCCGGCACCGCCTTCTATCCCGGCAACGGCATCACTCCCGGTCCCGGCGGCTTCGTCCTCGACCC GAGCCGGCCGGTGGAGGTCAACTGGCGGCAGAGCGTGCTCGGGCCACGCCTGCAATCCTCGCAGAACACCGGCCAGCGCCTGCTGCTCGGCTTCGACGGC CAGTTCGCCGGCTGGGACTACGATATCGGCGCCTCGTACAACCAGAACAAGGTGGTCGACCATATCCACAGCGGCTACGTCGACGATCGCGCCGCCGCCC TCGGCATCGCCAACGGGACGCTGAACCCGTTCGGGCCGCAGACCGACGCCGGCCTCGCCTACCTCGGCAGCCATGCCCTGAGCGGCGACTTTCGTACCTC GGTCGGCCGCGTCAAGGGCCTGGACGCCCGCGCCAGCCGGGAGATCGGCGACTGGTTCGGCGCCGGGCCGGCGGCCCTGGCGCTGGGCGGCGAATTCCGC AAGGAAGCGTTCCACCAGGACATCCAGGACTTCGCCGGCAACGTGCAGAGCCTCGGCGTCGATCCCGCCGCCACGGTCAGCGGCGAGCGCAACCTGAAGG CGCAGTACGCCGAACTCAACGTGCCGGTGCTGGACAGCCTGGAACTCAGCGCGGCGATCCGCCACGACAAGTACAGCGACTTCGGCAGCACTACCAACCC GAAATATTCGTTCCGCTTCCAGCCGTTCCGCCAGTTGGTCCTGCGCGGCGCCTACAGCGAAGGTTTCCGCGCGCCGTCGCTGTACGAACTGTACAACCCG ACCTTCACCACCTATACCAGCGCCAACTACGACGACCCACGCCTGTGCGCCGGCGGCCAGCCGAGCCAGGGCGGCATCGCCAACCGCGACTGCGCCCAGC AGTTCTACAACGCCACCGGCGGCAACACCGACCTGCGACCGGAAACTGCGCGCAACGTTACCCTGGGCCTGGTCTACCAGCCGCTGCGCGACCTTTCCGT CGGCCTGGACTTCTGGTGGATCAGGATCGCCAACCAGATCGCCGAGTTTCCCGAAGCGGCGATCTTCGCCGACCCGCAGGCCTACGCCGGACGCATCGTG CGCAAGGCCGACGGCTCGATCGATCACGTCGTCACCGGACTGGCCAACCTCGGCAAAGTGAAGACCAGCGGCGTCGACCTGAGCCTCGATTATCGTTTCC CGGCCAGCCGCTACGGGCAGTTCGGGCTCGACCTGCAAGGCACCTACGTGTCCCGCTACGACTTCCAGCAGCAGATCGGCGGCCAGTACCTGGACAACGT CGGCGACTTCCAGGGCGTCGGCGTGATCGCCCGCTGGAAGCACGTCGCCAACGCCACCTGGAGCCGCGACGCCTGGCAGGCCACCCTGAGCAACCGCTAC ACCAGCGGCTACAACGACTACGATCGCGCCAGCCACGGCAGGGTCGGCTCGTGGAACCTCTGGGACCTGGCCGGCAGCTACCGCCTCAGCCATGCGCTGG GGCTGACCCTCGGGGTGAAGAACCTGTTCGACCGCGAACCGCCGTTCAGCAACCAGACCTACACCTTCCAGAGCGGCTACGACCCGCGCTACACCGATCC CTACGGGCGCATCCTGTTCGGCCGCCTCAGCTACAGCTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCCGGCGCGGGCGCCCGGCCGGTATGGCCGGCAAGCCCGTCGACGGCTGTCCAGCTACCAGATCCGGTAGCCCTGCCAGATTTCGCAGGCGACCAGATC TGGCAGGTTGTTGGGCTCCCGGTGCCATGCAACCTATTACGCCTCTCGCCCCCCACCCGTTCGCGCAAGAGGACACCGCATGATCATTCTCGGGATCACC AACAACGACCTGGCCGGCGCCTGCCTGGTGCGCGACGGCGGGATCGTCGCCGCCGCCAGCGAGGAGCGCTTCACCCGCCAGAAGGACCACAAGGCCTGGC CGAGCCGCTCCATCGACTATGTGCTCGGCGAGGCCGGCATCGACCTGGCCGACATCGACCGCATCGCCTACGGCTGGAACGCCGGGTTCGACGCCGGGCG GCACCTCGACCTCTACCTGGACCGGGTCCTCGAGGAAGCCCGCGAGCGTCCCGAAGGCCTGCCGCACCTGCGCAAGCGGATCGCCGACGAGATGGCCAAC
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Amino Acid Sequence |
>TonB system transporter
MHRSLHTDPPLGAALLLALQLAPSSAAAAEGQAPVDPPTVQLQRIEVTGSAIRRVDAETAVPISVLRAEELRQQGVTSTEELIGRLSGNQGVYNSSRSVG SATGGASFADLRGIGANKTLVLLNGRRLANNAIDGSAVDLNTIPFAAIDRVEVLRDGASALYGTDAIGGVINFITRKSLNEGRVDSGYASPTQDGGGNQR NVSASWGFGELEEDRFNVFAVANYDKQERLGAKDRGYTYNYQPGRGLDYSSGTAFPGNWSQGANASNPLAAGGCKGADLIPRNGICRQSLWRYLDLVPET EKTSVFSRATGKLADEHNVSLEYFWSRNDNATQVGPGTLTGLQIDPGTAFYPGNGITPGPGGFVLDPSRPVEVNWRQSVLGPRLQSSQNTGQRLLLGFDG QFAGWDYDIGASYNQNKVVDHIHSGYVDDRAAALGIANGTLNPFGPQTDAGLAYLGSHALSGDFRTSVGRVKGLDARASREIGDWFGAGPAALALGGEFR KEAFHQDIQDFAGNVQSLGVDPAATVSGERNLKAQYAELNVPVLDSLELSAAIRHDKYSDFGSTTNPKYSFRFQPFRQLVLRGAYSEGFRAPSLYELYNP TFTTYTSANYDDPRLCAGGQPSQGGIANRDCAQQFYNATGGNTDLRPETARNVTLGLVYQPLRDLSVGLDFWWIRIANQIAEFPEAAIFADPQAYAGRIV RKADGSIDHVVTGLANLGKVKTSGVDLSLDYRFPASRYGQFGLDLQGTYVSRYDFQQQIGGQYLDNVGDFQGVGVIARWKHVANATWSRDAWQATLSNRY TSGYNDYDRASHGRVGSWNLWDLAGSYRLSHALGLTLGVKNLFDREPPFSNQTYTFQSGYDPRYTDPYGRILFGRLSYSF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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