Strain | Pseudomonas aeruginosa strain AZPAE14372 AZPAE14372_contig_10, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCGCGACCTCGACGCGGTGGAAGGGCTGCGCCGGCACTTCGTCGCGAGCGGCGTGGAGGTCGCCACCCAGGCCGAGGCCATCGCCCAGGTGCGCAGCCTC AGCCGCAACCTCGGCCTGGTGTTCTGGATCGTCGCCGCGCTGGCCATCGGCGGTGCCTTCGCGGCCATCGCCGCCAGCAGCCTGGCCGCCGTCGAACGCA AGCGCCGCGCCCTGGCAGTGCTACGTCTACTGGGCTTCCCGACCGCCGCGCTGGTCGGCTTCGTCATGCTCCTGGCGCTGTTCAGCGCCGTCTTCGGCCT GTTCCTCGCCGGGCTGCTGTACGCCGCCACGGCCGGCGCGCTGAACCACCTGTTCGACAACCAGAGCGGCGAGTTCGTCTGCCGCCTGCTGCCCAGCCAC TACCTGACGGCGCTGCTCGCCACGCTGCTGTGCAGCGTCCTGGCCGCCGCCAGCGGCGGCTGGCGCGCGGCGCGGATCGAAGCCGCAGAGGGATTACGCG
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DNA Sequence for Gene |
>NQ51_RS13545
ATGTTTGAGAAAGCCATTCTTCCGCTCGCCCTCGGCGCCTGCCTGGCATTTGCCGCGCCGGCCTGGGCCGAAGGCGACTCGCCGGACAATCCCAAGCCGC TGGCCGACGACGTCGCCCTGCCGCTGCCGTGTGGCGGCGAGATGGTCTTCCGGCATGTCTACGTACTCGCCGAAGGCGCCCTCGACGATCGCGAGGTCAA CCTCGGCTACGCCTTCAACGAAGGCGAGGCGGGCTACCAGCAGTCGTTCATCTCCGGCTACCGGCGCGACTACGTGAACGGCCAGTTCAGCCTCGCCGAC CTGGCACCGGCCTGGCAGCAGAAGCTCTCCGCCAGCCTGCCGAAGCCTGCCGCCGGCACCCCGCTGAAGCCGATGCTGTACTTCATCGGCAAGTACGAGG TGACCGCCCGCCAGTACGCCGCGGTGATGAGCCAGGCGGCCGCGCTCTCCGGCCAGGGCGAGGCGCCGGCCTGCGACGTGCCGGACGGAATGGCCGCGCG GCTGCCCAAGGTCAACCTCTCGCGCTTCGACGCCGAACGCTTCGGCGCGGTGTACAGCGCCTGGCTGCTGAAGAATCACCCGGAACTGCTGCCGGTCAGC GGCCGCGGCAAGAATCCCGAGGACGGCGGCATCGGCTTCGTCCGCCTGCCCACCGAGGTAGAGTGGGAGTTCGCCGCGCGCGGCGGCCAGGCGGTCAGCC GCCAGGAGCTGGAAGGCCGGCTGTTCCCGCGCAAGGTCGAGGGCAGCGACCAGGAAGGCCCGCTGGGCGACTGGGCGGTGTACAACCAGGTCGCCGGCGG CACCGGCCAGGCCGCGCGACTGTTGCCGGTGGGGATGAAGCGGCCGAACCCGCTGGGCCTGTTCGACGTGATCGGCAATGCCGCGGAGATGGTCCAGGAG TCCTTCCAACTGGTCCACGCCGGACGCCGGCAGGGCACATATGGCGGTTTCGTGGTGAAGGGCGGGAACTATCTCGAAGGCGAGATGACTCTATTCACCG GGATGCGCCGCGAATACCCGCTGTTCGCCGCCGACGGCAGCGAACAGCGCAACGAGACCACCGGTTTCCGCGTCGCCATCGGCGCGCTGTCCGCGCCGCG CTCGCGCTATCCCGAGCTGTTCGCCCAATGGCAGAAGGAAGGCCGACTAGCGGCATTGACCGATGCCATCGATGACGCTCAAGATCCCACCAAGCAATTG GACGGAATCATTGCCGCCACCCGCGACCCGCAGATGCAGGCGCAGTTGGCCCAGATAAACGAGGAACTCAAGCGTAACGTTTCGTTGATCGCCCGGCAGC GCGAAGAGGCCGCCGGAAACCTGATACAGTCGGCGGCACTGGTCGCCGAGACGATCAACAACTACAACATACGCCTGACCAACCTTAAGAAGGACAGGGA GAAAGCCGTGGCAGCCAGGGATCAGGCGACCGCCCAGCTCTATGCCGGCGCCATCGCCAACGGGCGCAGCGCCCTCGATGGCGCATTGGCCATCTACATC GACAACCTCGCCACCGGCACCCGTTACACCGACGCGGTGATCCAGGCGCAGTTCCAGCGCATCCAGGAAGAACTCAATCGCAACCCGGTTCTGGGCAAGA GCCTGGTCAAGCGCGCGACCCTGTTCGTCAAACACGTCGGAGATTATCGCCAGCAGCACCGGGCCGAGCCGGAGGCGGTATTGAAGGAATTGCTCGCGTC CAGCGGGCGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AGGAGTTCCGTCCGGCACCTCTCGGCAGCCGGGCGGTTCATCAAACCAGGAGTGAGATGCAATGAGCCAACCCAGCGAAAACCGTTTGATCACCTCGGCG CGCTACGCGCTCTGCCTGTTGACCGCCAGCGGCGTGCTGCTCAGCGGCTGCGCCAGCAGCGGCGTCGGCTCGGTCGCCCAGACCACCCGCGCGGAATACT ACCCGTCCTGCTACGAGCCGGTGTCGCACCTGCGCAGCACCGATAACGCGGTGCGCAACTCGGCCATCACCGGCGCCATCACCGGCGGCCTCCTGGGCGG CCTGGCCGGCGGCCTGGCCAGCGACGAGAACCGCGGCCGCAATGCCGCCCTCGCTGCCGCAGGCGGCGCCCTGGCCGGCGGCGCGGCGGGCTACTACATG GAGAAGCAGAAGCAGATCAGCGACGACCGCGCGCGCATCGGCTCCTACGCTACCGACGTCGACCGCAGCACCGTCGAGATCAACCGTAGCGTGGCCTACG
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Amino Acid Sequence |
>hypothetical protein
MFEKAILPLALGACLAFAAPAWAEGDSPDNPKPLADDVALPLPCGGEMVFRHVYVLAEGALDDREVNLGYAFNEGEAGYQQSFISGYRRDYVNGQFSLAD LAPAWQQKLSASLPKPAAGTPLKPMLYFIGKYEVTARQYAAVMSQAAALSGQGEAPACDVPDGMAARLPKVNLSRFDAERFGAVYSAWLLKNHPELLPVS GRGKNPEDGGIGFVRLPTEVEWEFAARGGQAVSRQELEGRLFPRKVEGSDQEGPLGDWAVYNQVAGGTGQAARLLPVGMKRPNPLGLFDVIGNAAEMVQE SFQLVHAGRRQGTYGGFVVKGGNYLEGEMTLFTGMRREYPLFAADGSEQRNETTGFRVAIGALSAPRSRYPELFAQWQKEGRLAALTDAIDDAQDPTKQL DGIIAATRDPQMQAQLAQINEELKRNVSLIARQREEAAGNLIQSAALVAETINNYNIRLTNLKKDREKAVAARDQATAQLYAGAIANGRSALDGALAIYI DNLATGTRYTDAVIQAQFQRIQEELNRNPVLGKSLVKRATLFVKHVGDYRQQHRAEPEAVLKELLASSGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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