Strain | Pseudomonas aeruginosa strain AZPAE15065 AZPAE15065_contig_6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
AAGGACCTGCGCGCGCGCCAGGAAACCCTGCAGTGGCTGTTCTGGCAGATGGGCGGGCTGGGGCCGATGGCAGGGCAGAACCACCATTTCAACCGCTTCG CCCCGGAGAAGATTCCCTACGCCATCGACCGGTACGTCAAGGAAACCGCGCGCCTGTACGGCGTTCTCGACCAGCGCCTGGCGGACCGCGCCTTCGTCGC CGGCGACGACTACAGCATCGCCGACATGGCCATCTATCCGTGGATCGTCCCGCACCAGTGGCAGGAGCAGGATCTCGCCGACTTCCCGCACCTGCAGCGC TGGTTCGAGAGCATTCGCCAGCGTCCGGCGACGCAACGCGCCTATGCTTTGGTGGAGCGCATCAATCCGCCGAAGTAGCGAGTCCCGAGCCGGCCTGCGG ACGTCCTCGCGGACGACCGCAGGCGGAGCTTGCGCAGCCCTGCGCTCCTCACTAACGTAGCGCCTCTCGACGCGACCACTCCCGCAGGAGCCCCCACCCC
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DNA Sequence for Gene |
>NT81_RS08145
ATGGCCTCGCCAGCCTTCATGCGTTTTCTTCCCCGTTGCGGCGCCGCCGCGGCCTTCGGCACCCTCCTGGGCCTGGCCGGTTGCCAGTCCTGGCTCGACG ATCGCTACGCCGACAGCCTGCCGCCGACCTCCGGCGTACAACCGATCAAGGGCCTGGCGCAAAACGTATCGATCCGGCGCAACGCGCTGGGCATGCCACT GATCGAAACCGGCACCTTCCATGACGCGCTGTTCGCCCTGGGCTACGTACACGCCTCCGACCGCCTGAGCCAGATGGTCAGCCTGCGCCTGCTGGCCCAG GGACGGCTGGCCGAGATGGTCGGCCCCGGCGCGCTGGAGATCGACCGTTTCATGCGTACCGTGAACCTGCGCCAGGCCGCGGAGATCCAGTACAGGAACG CCTCGCCGCGCCTGCAACGCTTCTTCGAGGTCTACGCGCGCGGGGTCAACGCCTACCTGTATCGCTATCGCGACAAGCTGCCGATGGACCTGGCCCAGTC CGGCTACCGTCCGGAATACTGGAAGCCCGAGGACTCGGCGCTGGTCTTCGCCCTGCTCAACTTCGGCCTGGCGGTGAACCTGCAGGAAGAAATCGCCTCG CTGACGCTCGCACAGAAAGTCGGCAGCGACAAGCTGGCCTGGCTGACGCCGACCTATCCCGACGAAAACCTGCCGTTCGACGAGGCGGAAAAGCTCAAGG GCCTGCGCCTGGACGGGCAGGTTCCCGGCCTCGCGGGCGTCGAGGGCGCGGCGCGGCAGGTCGCAGCGCTGAGCATGCTCGGGGTCGCCGCCTCGAACAA CTGGGCTATCGCGCCGCAACGCAGCCGCAGCGGCAAGAGCCTGATGGCCAACGACACCCACCTGCCGCTGAGCATGCCGTCGGTGTGGAACTACGTGCAG ATCCGCTCGCCCAAGTACCAGGCCGCGGGCGTTTCCATCGCCGGTCTGCCGGGCGTGGTGGCGGGCTTCAACGGCAAGCTGGCCTGGGGCATGACCATGG TCCTGGGCGACAATCAGGATCTCTACCTGGAACAGCTGCGACGCCAGGGCAACCGGCTCTATTACCTGGCCGACGGCAAGTGGCAGCCAACCCGCGAACG CCAGGAAACCTTCTTCATCAAGGGCCAGCGGCCGATCCGCGAGGTCATCCACGAAACCCGCCATGGCCCGCTGCTCAACAGCGCCCTGGGCGAGCGCAAG AACATCCTCCAGCCGCTGCCGCTGAAGAGCGGCTACGGACTGGCCTACCGGAGCATCCAGCAGGAAGCCGACAAGACCCTGGACGGCTTCTTCGACCTGT CGCGGGCCAAGACCATCGAGCAGGCCTTCGACGCCACCCGCGAGATTCGCGCGATGCCGCTGAACATCGTGTTCGCCGACGAAAATCACATCGGCTGGCA GGTCACCGGACGCTATCCGAACCGCAAGGAAGGTCGTGGCCTGCTGCCCTCCCCTGGCTGGGACAGCCGCTACGACTGGGATGGCTATGCCGACCCGATC CTCCACCCGTCCGACCAGGACCCGCAGCGGGGCTGGCTGGGTACCGCCAACCACCGCACCGTGCAGCCCGGCTACGGCGCCCAGTTGTCCAATTCCTGGT ACTACCCGGAGCGCGCCGAGCGCATCGCCCAGCTCGCCGGTGCCAGCAAGAGCCACGACACCCAGAGCATGATCCGCATGCAGTACGACCAGACCTCGCT GTTCGTCGCCAAGTTGCAAGCCATGTTCGACAATCCCGGCATGGCGCTGCCGCTGCACCAGGCCATCGACGCCTTGCCGGAGGCGCAACGCAGCCGGGCG CGGGAGGCCTACGACCGGCTGATGGCGTTCGACGGCAAGCTGACAGCCAGCTCCAGCGACGCCGCGCTGTACGGCGCCTTCCTCCACGAGAGCGCCAGGC AGATATTCCTCGACGAGCTAGGACCGGAGGACGGCCCTGCCTGGAAAGCCTTCGTCGAGACCGCCAACCTCTCCTACTCGGCGCAAGCCGACCACCTGCT CGGGCGCGACGACAGTCCGTTCTGGGACGATACCCGCACTCCGCAGAAGGAGGACAAGCCGGCAATCCTCGCGCGCAGCCTCGCCGCCGCCGTGGAGTTC TGCGAACAGCGACTGGGGAGCGAGCGCAAGGCCTGGCAATGGGGCAAGCTGCACACCTACGAATGGCAGAGCGACAGCTCGAAAATGGCCCCCTACCTGG GCGCCGGCGAGCGCGCCGGACTCGGCGCGATCAAGGGCTATCTCGATCGCGGACCCTATCCGGCCGGCGGCGACCACACCACGCTGGACGTATCGGCCTA CGGCTGGGGCCAGGACTTCGACACTTGGCTGATCCCGGCGATGCGGCTGATCGTCGACTTCGGCCAGAGCGAACCGATGATCGGCGTGAACAGCAGCGGC CAATCCGGCAATCCGGCCAGCCCGCACTACGCCGACGGTATCGACGCCTGGCTCAAGGGGCGCTACGTCAGCTTCCCGTTCCAGCCACAGAACCTCGAGC GCGTTTACGGCAACAAGCGGCTGACGCTCACTCCCGCTCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACGGACGGCGCGGAACTTTTCCTCCGCGCCGTGGCTCTGAACAGCCGACTTACTCCATGATCATCTTCAGGGCGTCCTTCCGGACGCCCTTCTTTTATCC CCCTCCCGGAAAGCCTCCGTTTTCTCGAAAGCCCGGGCACGGGATCGAACCGATCTCACTCCTCTCCGGCCTCTTCCACGGGCGCCACCAGCGCCCGGTC CAGCCAGTCCGTCGGCAGGCTCTTGCTGGCGCGGGCACCGAGCAGCTTGAGTTGCTCGCTGCGACTGATCAGGTTGCCACGTCCCTCGGTGAGCTTGTTG CGCGCCGCGGCATAGGCCTTGTCCAGTTGCTGCAGGCGCGAACCGACCTCATCGAGGTCCTGGACGAAGAGCACGAACTTGTCATACAGCGAACCGGCAC GTTCGGCGATTTCCCGCGCATTCTGGTTCTGCCGCTCCTGGCGCCAGAGGCTGTCGATTACCCGCAGGGTGGCCAGCAGGGTGGTCGGGCTGACGATCAC
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Amino Acid Sequence |
>acyl-homoserine lactone acylase subunit beta
MASPAFMRFLPRCGAAAAFGTLLGLAGCQSWLDDRYADSLPPTSGVQPIKGLAQNVSIRRNALGMPLIETGTFHDALFALGYVHASDRLSQMVSLRLLAQ GRLAEMVGPGALEIDRFMRTVNLRQAAEIQYRNASPRLQRFFEVYARGVNAYLYRYRDKLPMDLAQSGYRPEYWKPEDSALVFALLNFGLAVNLQEEIAS LTLAQKVGSDKLAWLTPTYPDENLPFDEAEKLKGLRLDGQVPGLAGVEGAARQVAALSMLGVAASNNWAIAPQRSRSGKSLMANDTHLPLSMPSVWNYVQ IRSPKYQAAGVSIAGLPGVVAGFNGKLAWGMTMVLGDNQDLYLEQLRRQGNRLYYLADGKWQPTRERQETFFIKGQRPIREVIHETRHGPLLNSALGERK NILQPLPLKSGYGLAYRSIQQEADKTLDGFFDLSRAKTIEQAFDATREIRAMPLNIVFADENHIGWQVTGRYPNRKEGRGLLPSPGWDSRYDWDGYADPI LHPSDQDPQRGWLGTANHRTVQPGYGAQLSNSWYYPERAERIAQLAGASKSHDTQSMIRMQYDQTSLFVAKLQAMFDNPGMALPLHQAIDALPEAQRSRA REAYDRLMAFDGKLTASSSDAALYGAFLHESARQIFLDELGPEDGPAWKAFVETANLSYSAQADHLLGRDDSPFWDDTRTPQKEDKPAILARSLAAAVEF CEQRLGSERKAWQWGKLHTYEWQSDSSKMAPYLGAGERAGLGAIKGYLDRGPYPAGGDHTTLDVSAYGWGQDFDTWLIPAMRLIVDFGQSEPMIGVNSSG QSGNPASPHYADGIDAWLKGRYVSFPFQPQNLERVYGNKRLTLTPAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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