Strain | Pseudomonas aeruginosa strain AZPAE15065 AZPAE15065_contig_6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCGTCGCCGCGGGTTCCCGCCACCCTCGACAGGCCAGGGTCGAGGCTTTCCGCGCGTGGCGCGGGTTGGTTGCGGTTCGCGCAGCCCAGCGCCGTGGA TATCCCCAGCGCCAGCGCCACGCAACGCAGATGACTGGCAAGCGGCATTGCCCTGCTCCCGTGTCTGAAAGAGCGGGGAACGGTAAGGCAGGCGCGGGCG GCCTGCGCCGGCAAAAGCGCCAGTCATCGTCGCGAAATGGACAGTCGGCGGATTTTTCAGCGTTGCCGCATCAGGTACGGGCCGCAGCCCAGGGCCAGCA GCCCGGCCGGGATGGCCAGCAGGGAGATGCGGGCGATCTGCCGGGAGTAGCGGTTCACCCCGCCTTCGACGAGGCGCAGGCGCTGGAACAACTGGCGGGC TAGCCTGCGCCTTGGCGTGGCCGGGGGCTCGCCTTCAACCTGAACGAAGCGTTTCGCCAGGTGGTCGGAACAACAGGTCCCCGTTACGGAAGCCGAGTCC
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DNA Sequence for Gene |
>NT81_RS07045
ATGCCGCTGCGCCGTGCCGTTTTCGCCATCCTTTTCGCGTCCCTGGGCAGTCCTTTGGTCGCCGCCGAAACACCCCTGCGCCTGGAGCGCCTGGAGCGCT GCGGCGATCTCCTGGCCAGCGAGCGGCAGGAGTGGTGCCTGCGCGTGCGCGGCCTGGGCGCCGGCCTGCCGCGCCTGTTGCTGGACGGCCGCGAACTGCC GGCCACCGCCCTGCGGCGCGAGGGCGACGGCCTGCGGCTCCGCCTGGACCGCCGTGGCCACGCCAGCGGTCCGCTTTGGCTGGAGCAGGGCGGGCGCAGC AGCAATCCGGTATGGCTGACCCTGAACGGCAGTCATGTGCTCGCCGCCGCCGGTCCCGACGAGGTGGCGAAGAACATGGATGGCCTGACCACCTACGTCG ACCTAGTCAGCCTGTTGATCGAGGAGAACCACGACGGTCGCCGGGAGGCCGAACGCCTGGCCGATAAATATGGCGCGCGGGTGGTCGGCGCGATCCCGCC GTTGAACCTCTACCAGTTGCGCCTGCCGGCGCGCGACCTCGTCCAGCGCGACGCGCTGGTCCTCCGCATCGGCAGCGAGACCAGCGTGGACGCCGTGGTG GTGGAGGAGTCCGCGCCGGAGAAGGGCGAGGAAACCGAGGCGGCGCGCCGGCCCGTGGACAAGCCGGACAGCGACTCCGACGAGTGGGCGGCCAATCGTT TCATGGACGCGGTGAACTATTACCAGCGTCGGGTCCGCGCCCGCCAGGCGCCGCTGGAGACCCGCCCGGTGCGCATCGGGGTGATCGAGCGCGACGTCGA CTTCGACGCTCCCGACTTCGCCGACTACCTCGGCCCCTGCAAGGCGCCCGCACCGCGTACCTGCCTCTACGCGCGCGATGCCGAACGTCCCGACAACCAC GGTTCGACGGTCGCCGGCATCCTCGCCGCGCGCTGGGACCAGGGCGGCAACAGTGGTTTCCTGCGTGGGTTGGACCGCGCCAGCCAGGGTTTCGAAGTGA TCGTCGAGCGCAATTCGGATGCTGGCATCACGGCCAACGTCGCCGCCTCGGTGAACCTGGTGGAGGATGGCGTGCGGGTGCTCAACTGGAGCTGGGGCAT CCACCGCGTCGGCGCTCGCGACGTCGATGGCGACGAGGTGGATTCGCTGGTGCGCTCGGGGATTGCCATGAGCGGCTACGAGGAGTTGCTCGAGGAGTTC TTCCTCTGGCTGCGCAAGGAGCATCCGGACGTGCTGGTGGTCAACTCCGCCGGCAACGGCTCGTCCTACTCCGGTACCGACGAATACCGCCTGCCGTCCT CCTTCGTCACCGAGCAGTTGCTGGTGGTGGGCGGCCACCAGCGCAGCGAGCGCCAAGGCCTGGCGGTGGACGACCCGGCCTACGCGGTCAAGCGCAGCAC CTCGAACGTCGACATGCGGGTGGATGTCACCGCCGCCGCCTGTACCCATGCCTCGACCCTGGAGCGGGACGCGCGGGGCGAGGTGCACTGCGGCACCTCC TATGCCACGCCGATGGTCGCCGGCACGGTCGCCGCCATGCTTTCCCTCAACCCGCGGCTGCGACCCGAGGAGATCCGCATGCTGCTCCGGCGCAGCGCCA TGACCATCGGCGGCGACTACGATTTCGAGCCGGCCGATGCCGAGGACCTCACCGCACCGATCCTGCCCTCGGAGCGCGGCTACCGCCTGGACCACCGCGA CGTCGGCCGCTCGGCGCGGCTGGACATGCAGAAAGCCCTGGACCTGGCGGTGAAGAGCCGCGAGCGCGTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGTTCCGCCGGCCCGGGGCCTCACGGCGAGGCTTCCAGCAGCCGGGCGAGGCGTTCGGCGAGTTCGTTGTGGCGGAACGGCTTGGTCAACACCTCGAA GCCGTTGAGTTGCTCGGGCCTGAGGTTGGCGTAGCCGGTGATGACCAGCACCGGCAATTGCGGGAAGCGCTGGCGCAGTTCCTCGGCAAGCTGCACGCCG GTCTTGTCGGCCATGAGATGGTCGGTGACCAGCAGGTCGGGCGCCAGGCCGCGCTCGACCTCGCCCAGGGCTTCCTCCGCCGACGCCGCCTCGCTGACCT GGTAGCCGAGATCGCCGAGCAGCAGCGCGGTGGTGTAGCGCACCATCCTGTCGTCGTCGACCAGCAGCACGTGGGTCGGCCGCGACGCCTCCGGTGCGTC CGGGCAGCTTTCTGCGGTGGATTGCGTCTGCTCCGCGGTGATCGGCAGCCAGATGCTCACCCGGGTCCCCTTGCCGATCTCCGAGTGGATGCCCAGGCCG
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Amino Acid Sequence |
>hypothetical protein
MPLRRAVFAILFASLGSPLVAAETPLRLERLERCGDLLASERQEWCLRVRGLGAGLPRLLLDGRELPATALRREGDGLRLRLDRRGHASGPLWLEQGGRS SNPVWLTLNGSHVLAAAGPDEVAKNMDGLTTYVDLVSLLIEENHDGRREAERLADKYGARVVGAIPPLNLYQLRLPARDLVQRDALVLRIGSETSVDAVV VEESAPEKGEETEAARRPVDKPDSDSDEWAANRFMDAVNYYQRRVRARQAPLETRPVRIGVIERDVDFDAPDFADYLGPCKAPAPRTCLYARDAERPDNH GSTVAGILAARWDQGGNSGFLRGLDRASQGFEVIVERNSDAGITANVAASVNLVEDGVRVLNWSWGIHRVGARDVDGDEVDSLVRSGIAMSGYEELLEEF FLWLRKEHPDVLVVNSAGNGSSYSGTDEYRLPSSFVTEQLLVVGGHQRSERQGLAVDDPAYAVKRSTSNVDMRVDVTAAACTHASTLERDARGEVHCGTS YATPMVAGTVAAMLSLNPRLRPEEIRMLLRRSAMTIGGDYDFEPADAEDLTAPILPSERGYRLDHRDVGRSARLDMQKALDLAVKSRERVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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