Strain | Pseudomonas aeruginosa strain AZPAE15065 AZPAE15065_contig_6, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTTCCTCTCGGTGTTCAACGCCATCGTCGCCATCGTCATCCAGAGCGCCCGGGTGATCTTCAGCAGCGGTCGCGACGCGCTCTGGATGCCAGCGTTGAAC CGTGCTTTCACCCGTATCCATCCGCGCTGGGAATCGCCCTGGCTGGCCACGCTGTTCCTCGCCATTCCCTCGGCGGCGCTGAGCTTCAGCTCCAACCTGG CCGAACTGACCTCGTTCACCGTGTTGCTGATCGTCATGGTCTACCTGATCGTCGCCCTCTGCGCGCTGTTCAGCCGGGTGCTGCGGCGCGACCGCGAGCA TCCCTACCGGATGCCGCTGTGGCCGCTGCCGGCGCTGCTGGCGGTGAGCGGCGCGGGATACCTGCTGCTCAACCTGTTCCTGGCGGCCTCGGCCAGGGAC GTGATGATCATTGTCGGACTGCTGGCGGTGTCGGTGATTCTCTACTGTACCTACGGCAAGCTCAGTCCGGCGTTCCAGAAGCTTTGAAACAGGAGTCCGC
|
|
DNA Sequence for Gene |
>NT81_RS06350
ATGCGCGCTCGACAACTTGGCATCACCCTCGGCCTGGGCACTCCCGGCCCGTTCAACGCGATCACCGACGTTCCCGGCGTGCGCGTCGGCCACAGCACCC TGAACCAGCGGATCGACGGCAGGCAGGTTCGCACCGGCGTCACCCTGGTCCAGCCGCGCGCCGGTGCGGCGCGCCTGCAACCCTGCTTCGCCGGCTGCCA TGTGCTCAACGGCAACGGCGACGCCACGGGCCTGGAGTGGATCCGCGAAGCCGGCCTGCTGACCACCCCGATCGCCATCACCAATACCCACAGCGTCGGC GCGGTGCGCGACGCGCTGATCGCCGAGGAGCGCGCCGAACTCGGCGACAGCGGGCTGTACTGGTGCATGCCGGTGGTGATGGAGACCTTCGACGGCCTGC TCAACGATATCTGGGGCCAGCACGTCGGCGCCCGCCAGGTCGGCGAGGCGCTGGCCTGCGCCGAGTCCGGACCGGTCCGCGAAGGTTCGGTGGGCGGCGG CACCGGGATGATCTGTCACGAGTTCAAGGGTGGCATCGGTAGCGCATCGCGGCGGCTTCCGGCGGAGCAGGGCGGCTGGACGGTGGGCGCGCTGGTCCAG GCCAACCACGGCCAGCGCCGCGAGCTGCGGGTCGACGGCTATCCTGTCGGCCGCCGGTTGGGCGACATCCCCTCGCCGTTCAGCGAGGAAGGCACCCCGG GCATGGGCTCCATCGTGGTGATCCTGGCCACCGACGCGCCGCTGTTGCCGCACCAGTGCCAGCGCCTGGCGCAGCGCGCCTCGATCGGCATCGCTCGCAC CGGCGGTGGCACCGAGGACTCCAGCGGCGACGTGTTCCTCGCCTTCGCCACCGGCAACCAGGACCTGCCGCCAGCCGACTATGCGCGCAAGGACCTGCCG CAGAGCACGCCGCTGCGGATGCTCAACAACGACCACATCTCGCCGTTGTTCGCCGCGGCGGCGGAGGCGGTGGAAGAAGCCATCGTCAACGTGCTGCTGG CCGGCGAGGACATGCGCACCGAGGACGGCCGGCTGGTGCCCGCGCTGAAGGGGGAGAGGCTCCTGGCGGCGCTGCGCGAGACCGGCTGGCCGGGACGCTG A
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AAGCGGCTCAGCGCCAGCCGCGGGTGCGCGCCACCGCTTCGCTGAAACGCACCTGCCAGCGCCGGGCGGTGCCGGCGTCGACCCGCGGCTGGAACTCCGT GCGGGTGTTGCGCGGCTCCGCCAGCTCGTAGCCGAGGCCACGCGCGGCAAGGGCGGCGCAACCGAAGGCGGTGAGTTCGTCGAAGCGCTGGGTGACGATG TGCCGTTGCAGGCTGTCGGCGAGGAACTGGGCGAAGTAGGGGCTGCGCGCCAGGCCGCCGTCGATGGACAGGCGGTCGGTGACCTTCAGGTAGCCGTCCA TCGCCTGGATCACCTCGGCGCTGCGTAGCACCACGCCTTCGAGCAGGGCCTGGCAGAGGTCCTCGCGGCGGGTGCCGGCGTCCATTCCCAGCCACATCGC GCCGGCGCTGCGGTCCCAGTGCGGGCATGCGAGTCCCGACAGGGCCGGGACGAAGGCCAGGCCGCGCTCGATGGCCGGCGGCCGGTCGAAGCCGGCCAGT
|
|
Amino Acid Sequence |
>hypothetical protein
MRARQLGITLGLGTPGPFNAITDVPGVRVGHSTLNQRIDGRQVRTGVTLVQPRAGAARLQPCFAGCHVLNGNGDATGLEWIREAGLLTTPIAITNTHSVG AVRDALIAEERAELGDSGLYWCMPVVMETFDGLLNDIWGQHVGARQVGEALACAESGPVREGSVGGGTGMICHEFKGGIGSASRRLPAEQGGWTVGALVQ ANHGQRRELRVDGYPVGRRLGDIPSPFSEEGTPGMGSIVVILATDAPLLPHQCQRLAQRASIGIARTGGGTEDSSGDVFLAFATGNQDLPPADYARKDLP QSTPLRMLNNDHISPLFAAAAEAVEEAIVNVLLAGEDMRTEDGRLVPALKGERLLAALRETGWPGR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|