Strain | Pseudomonas aeruginosa strain AZPAE15065 AZPAE15065_contig_43, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAACCTCCCCCGCCGAGACCCCGCCGACGACAGGCCCGAACCACGGGCCTTTGCCTGCTCGCCATCATTGTGACGTCAAATTAATGGCGAAATAAAACCA AATTACGTTGCCTGAAATAATGCACATCTGCACAATTGGCCCTTTCGCCAAAAGTTCGACACACGCTTTCGATCCATGATTTCGGCCGCGGGCCGGGCGA GAAACTGATAGGGATAGCCATGGCGGCGAACTGGGGGTTGCGCGGCAAATCGGTG
|
|
DNA Sequence for Gene |
>NT81_RS27670
GTGGCGCTGTTGCTGGCCTGTGCCCTGGCACTGGTCCCGGCGGTGCTGCTGGGCTGGCGCGCGATGGACGACATCCGTACGCACTTCGGCCTGGCCTACG CGAAGAACTTCACCCTGCTGCACCGGCAGAAGATCCTCGCCCCGGTCTCCCGCGAACTGGCGTTGTCGCGCCGTTTCGCCGAATCGGTGGTGACCCGCGA CTGGCTGCTGAAGGAAGACGACCCGGCGCGCCGCGCGCTGTTCTTCCGCGAGGCCGAGGGCTACCGCGGCGACTTCCGCGACCACGCCTACTTCATCATC GCCAGCGGCTCCCAGCACTACTACTTCAACGACGGCAGCCAACCCTACAGCGAACGGCCGCGCTACACCCTGGAGGCCGGCGACCCGGAAGACGCCTGGT ACTTCAATACCCTGCGCAACAGCGCCGCCTACAACATCAACGTCAATGTCGACAGCAAGCTGAACCTGACCAAGGTCTGGTTCAACCTGGTGATCCGCGA CCAGGGCCGGCCCATCGGCCTGGCCGGCAGCGGCCTGGACCTGAGCGGCTTCCTCGACGACTTCATCATCGCCCGCGAGCCGGGCGTGACGCCGATGATC GTCGGCGACGACGGCGCCATCCAGGCCCACCCGGACCGCCGCCTGATCGCCTACAGCTCCGCCGCCGGCGGCGCCAGTGAACGCCACCGGGTGTTCGACC TGCTCGACCAGCCGGAACAGCGCGATGCCCTGCGCGAGGCCATGCGCCTGGCCCGCGCCAAGGCCGGCTCGGTGCACTGCCTGTGGGCCGGCCTCGACGG CCGCCAGCAACTCTTCGCCGTGGCCTACATTCCCCAACTGCGCTGGTACGTGCTCACCGCCGTCGACCTGCACGCCGCCCAGGTCCTCGACAACCGCTGG CTTTGGCCGCTGGCGGGCACGTTCCTGCTGTTGCTGGTGGCCCTGCTGCTGGGCTTCGCCTATGCCGTCGAGCGCCTGCTGTTGCGCCCCCTGCGCAGCC TCAAGCGCTCGGCCAAGGCGATCGCCGCCGGGCGCTACGACACGCCGCTGCCGCTGGCGCGCCAGGACGAGATCGGCTCGCTGTCGAAGGCCTTCGCCAG CATGGCCGACCAGGTCCGCCGGCACACCGCCGAGCTGGAAGACAAGGTCCAGGAGCGCACCCAGGCGCTGGAGGAAGCCAACCGCGAGATGGCCGCCGCG CAGAAGAAGATCGGCGACAGCCTCGACTACGCCAGCCTGATCCAGCGCGCGATCCTCCCCGACCGCCAGCTCAGCGCCACCCTCGGCGAGCATCACTTCA TCCTGTGGAAACCGCGCGACGTGGTCGGCGGCGACTTCTACGTGTACCGCGAGCAGGCCGACGGCTACCTGATCGGCGTGGTCGACTGCGCCGGTCACGG CGTGCCCGGCGCGCTGATGACCATGCTCGCCCGCGCCGCCATCGACCACGCCATCGAGGCGGTGGGCAGCCGCGACCCGGCGGCGATCCTCGGCGAGACC GACCAGGCGATGCGCAGCATGCTCAGCCAGGAGCAGATCCCCCAGGCGCTGGCCACCAACATGGATGCCGGGCTGGTCTGGGTCGACCGCCGGCGCCGCC AGCTGGCCTTCGCCGGGGCGAAGATCTCGCTGTACACCAGCGACGGCGAGGAGGTCCAGGAACTCAAGGGCGCGCGCCGGGCGATCGGCGACAAGCGCCG TGGCGACTACCGCAACATCGAGGTACCGCTGGCGCCGGGCTGGACCTTCTACCTGAGCACCGACGGTTTCCTCGACCAGGCCGGCGGCGAACACGGCTTC GGCTTCGGCAGCCGGCGCTTCGCCGACATGCTCCGCGACCACGCGCGGCAGCCGCTCCCCGAGCAGGCCGAGGCCTTCGTGGCGACGCTCGCCGAGTACC AGGGCGAGCACCCGCAACGCGACGACATCACCATCCTGTCCTTCCGATTCGACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GGGCACCCATGGAAACGCTAGACCTGCTGGCCATGCGTGAAAGCTACACCCGCCAACGCATCCTGCTCTGCTTCAACGGACCGATCTCGCGCAGCCTGAT CGAGGAGATAGGCCACGCGCTGCGCAACTACCTGCACGCCGAACAGGCCAAGCCGAGCGAAGCGATGGACGTCTTCGCGGTGTACATCGAGATGACCCAG AACATCCGCCACTACGCCAATCTCAAGGGCTACGGCGAACACGAGGCGGCGGCCACGGTAGCCATCGCCCGCAACGAGGACGGCCACTACGTGGTGTCCG CCGGCAACCTGGTGGAACGCGACGACGGCCAGAGCCTGGTGCGCAGCATCCAGGCCATCGCCAACCTCGACAAGGCCGCCCTCAAGGCCGCCTACAAGGA GCAGCTACGCCGCCCGCGCGACAGCGGCTGCGCCAGCGGAGCCGGTCTCGGCCTGCTGGACATCGCCCGCAAGTCCAGCGAACCACTGGCCGCATCGCTG
|
|
Amino Acid Sequence |
>histidine kinase
MALLLACALALVPAVLLGWRAMDDIRTHFGLAYAKNFTLLHRQKILAPVSRELALSRRFAESVVTRDWLLKEDDPARRALFFREAEGYRGDFRDHAYFII ASGSQHYYFNDGSQPYSERPRYTLEAGDPEDAWYFNTLRNSAAYNINVNVDSKLNLTKVWFNLVIRDQGRPIGLAGSGLDLSGFLDDFIIAREPGVTPMI VGDDGAIQAHPDRRLIAYSSAAGGASERHRVFDLLDQPEQRDALREAMRLARAKAGSVHCLWAGLDGRQQLFAVAYIPQLRWYVLTAVDLHAAQVLDNRW LWPLAGTFLLLLVALLLGFAYAVERLLLRPLRSLKRSAKAIAAGRYDTPLPLARQDEIGSLSKAFASMADQVRRHTAELEDKVQERTQALEEANREMAAA QKKIGDSLDYASLIQRAILPDRQLSATLGEHHFILWKPRDVVGGDFYVYREQADGYLIGVVDCAGHGVPGALMTMLARAAIDHAIEAVGSRDPAAILGET DQAMRSMLSQEQIPQALATNMDAGLVWVDRRRRQLAFAGAKISLYTSDGEEVQELKGARRAIGDKRRGDYRNIEVPLAPGWTFYLSTDGFLDQAGGEHGF GFGSRRFADMLRDHARQPLPEQAEAFVATLAEYQGEHPQRDDITILSFRFD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|