Strain | Pseudomonas aeruginosa strain AZPAE15065 AZPAE15065_contig_40, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
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DNA Sequence for Gene |
>NT81_RS26760
GATATCGCCCGCGACGATGCGGGGGGCTGGGCAAATCGCTTGGAGAACATTTCCGGGAATTTAGAGAGCACAGGTGATATGCGTTTCTCCGTGAGTTCAC TTCTCAATAGAAGGGAAACTCTAGAGATTGAAGGTGACTTGCAGAATAGCGCTATTGGCGTCCGCTGTACGGGGTGTCAGCTTTCTGAGAGGTGGGGAAA AACTAGGTCTTCGAGCGAGCTTGTCTGGATCAGGGAATATAAGTCTACATTGGGAGAGTCTTCTGCCGCTGCTTCAATTACGGCTGGTCGAGATCTGCTT GTTGTAGGTGCAAGCCTGCAGAATATTGCTTCTAATATAAGTGCTGTAAGAGACGCCACGCTATCTCTGAGTAATTTCGAAAACAAAGGTTATGCGTTAG GGGAATATGCGGTCAGGGGCGTTTATTCGCCGCCGAGTAAATTTGGCGAAGAATTGCTTATGCGCATATTGGCGTATAACGCTGTCAACGATCCCAGTTA TGGGGAGGGATATGCGAGCACAGGGGGGAGACTTCCGAATATTCATTATTTCGACAAGAATTTTAATGAAAAAGTCTCTCCGCTGGAGGTCATTCATGGA AACGGGAAAAATGGTGGGCCGGGTTGGCACCTGTACTTCGGTACCTTAGATGTTGAGTATCCGGACACAGATCGCTGGAATAAGGCTATTGGACGAATAC CGGCGCCGAATTATTCATCGAAAAAAACGGATGCTATTCCAGATCTACTTAAGGGATTGGCTCCTCTCGATGAGTTGACGATTAACAAAGGGGCAAACTC AACGGTTGGTGCTGTCGTGCAAGCTGGCGGTCGTGTAACGGTGAATGCTGCGGAGAGTTTCAATAATTCTGTCCTACAGGGATTTCAGGCCGTTCAGGAA ACCCAGTTACCTCATCAGGACATAGCTGTTTCAAGCACGACGAGCGCCGTAGTGACTCTGAAGAGTCAACTGCCAGCGGATTTGGCAAGGCAACAGATCA ATCCTCTCACCCTGCCGGGCTTCAGCCTGCCTCAAGGCCAGAATGGGCTCTTCCGCCTGGCGTCCCAAGGAGCCCAGGTGAACCAGGCAAGTGGTGCTCT GAAATCCGCCAGCGATCTCACCCAGAGCGGCCATGGCGTATCTGTATCCGCACAGACAGGCAGTGGCGCAAGTGGCTGGAGTACCCAGGCGCGTCGTGTC GGCGATGATCGGGTCACCTCGCTTGCCGGTTCCGCCTATCAAGGCCGGGTAGCTGAGGCTATCGATGCGCTACGGGCTTCCGCGCCAATCTCGGGCGACG GGGGAAACACTGGCCGTTTCCAGGCCGGTGAGCACCAGGCGACCACGGGACTGGGTGGACTCGTCGAGGGCAATGCATCGGGTCACAGCGGCAATGGCGT CATCCTCGCCGATCTGCGCGGTGGTCTACCCTCGTTCTCAAGCCTTCCCGCGGCTGATCGTGTTCAAGGCACAGTACCCGGTTACGATGGGAATGGAACT ATTCTCGCCAATTGGCAGGGTGCGCAGGCGACGGTCCAGGCCTCGCCTTTGACAGTGCGTGTAGAGGGGGTAGTCTCCAGTCCAGGTGGCAATGGCAGCA TCCTTGCCGATCTGCCGGCTGAGCAGTCGTCGGTGCAGGCACTGCCTTCGGCCGTTAGGGCTCAGGGCAGCCTGCCTCGCCTCGAAGAGCGGAGCGCCCT TCTTGCCGAGCCTCCGGTTGGGCAGCCGGCGCTGCAAACCCTGCCGTCGGTTGCGCGCGTTGAGGGCGTGCCCAGCAATGCCACACCGAGCAACAGCCAC AAGTATCTGATCGAGACCAACCCGGCGCTCACCGAGCTGAAGCAGTTCCTCAACTCGGACTACCTGCTCGGTGGCCTGGGTATCAATCCGGATGACAGCA AGAAGCGCCTGGGCGACGGTCTATACGAGCAGCGCCTGGTACGCGAAGCGATCGTCCAGCGTACGGGGCAGCGCTTCATCGCCGGATTGAACAGCGACGA AGCGATGTTCCGCTATCTGATGGACAACGCCATCGCCAGCAAGGACGTATTGGGACTGACCCCTGGCGTCACCCTCAGCGCCGCCCAGGTGGCGGCGCTG ACCCACGATATCGTTTGGCTGGAAGAAGTCGAGGTGAATGGCGAAAAGGTCCTCGCCCCCGTGGTCTACCTGGCCCAGGCCGAGGGGCGGTTGGGCCCGA ACGGCGCGCTGATCCAGGGGCGCGACGTGAACCTGATCACCGGCGGGGACCTGAGGAACGCCGGTACCCTGCGCGCGCAGAACGACCTCAGCGCGACAGC CGGCAACATCGACAACAGCGGCCTGATCGAGGCCGGCAACCGCCTCGACCTGCTGGCCAGCGGCTCCATCCGCAATGATCAGGGCGGCATCATTGCCGGG CGCGAGGTAAGCCTCTCCGCCCTTACCGGAGACGTCATCAATGAACAGACGGTGACCCAGCACCAGTCCTCCTACAGGGGAACCGGTACCACTGAGGCAT TTGCCGATAGCGCCGCGCGTATCGAGGCTGCGCAGAAGCTGACCGTTTCGGCAGGACGCGATGTAGCCAATATTGGCGGTGTCATCGACAGCAAGGGCGA CCTCGCCTTGCAAGGCGGCAGGGATGTCCTGGTTTCGGCTGCGGTAGCGGAGCGGGGCTGGACGGCAGGAAGCCAGGCATACCAGACCCAGACGACCCAG ATGGGCGCCGAGGTCGTGGCGGGACGCGACATCAGCGTCAGCGCCGGACGCGATATCAGCGTCGTGGGCAGCCGCATCGACGCTCGTCGCGACGTGACAT TCGAGGCGGGTCGCGATGTGGGCCTGGTCGCGGCTGCCAACGAAGAGCATGCCTATGGCAAGACCAAGAAGGTCACTTTCCAGGACGACAAGATCACCCA GCAGGCCACTCGCGTGGACGCTGGCGGCGACCTGGCGATCAATGCCGGACAGGACCTGCGGCTGGTCGCGAGCCAGGCCAGCGCCGGTGACGAAGCCTAC CTGGTGGCCGGCGACAAGCTGGAGCTGCTGGCCGCCAACGACAGCAGTTACTACCTCTATGACAAGAAGAGCAAAGGCAGCTTCGGTAGCAAGAAGACCC GGCGCGACGAAATCACCGATGTGACGGCAGTGGGCAGCCAAATATCCAGCGGCGGCGACCTCACCCTGCTCAGTGGCGGCGACCAGACCTACCAGGGTGC GAAGCTGGAATCGGGCAACGACCTGGCCATCGTCAGCGGCGGCGCGGTGACCTTCGAGGCGGTGAAGGACCTGCACCAGGAGAGCCACGAGAAGAGCAAG GGCAACCTGGCGTGGCAGTCGTCGAAGGGCAAGGGCCAGACCGACGAAACCGTACGCCAGAGCCAGCTCGTCGCCCAGGGCAACCTGGCGATCAAGGCCG TGGAAGGGCTGAAGATCGACCTCAAGCACATCGACCAGAAGACCGTGAGCCAGACCATCGACGCGATGGTGCAGGCGGATCCGCAACTGGCCTGGCTGAA GCAGATGGAGCAGCGCGGCGATGTGGATTGGCGGCGCGTGCAGGAACTGCATGACAGCTGGAAGTACAGCAACTCCGGGCTGGGCGTCGGCGCGCAGTTG GCGATAGCGATCGTTGTGGCCTACTTCACGGCGGGTGCGGCGAGTGCGGCATTGGGATCGATGGCGGGTGTGGGGGCGGGCTCAGGAAGCATGATGGCTG CTGCCGGTAGCACTGCAATGGTCCAGGCCGGTACAGCAGTAGGAACAGCTGCCGCCGGCTGGGCGAATGCCGCTGGAACTGCCGTGGCTATGGGCATGGC CAGCAATGGAGCGATCAGCACCATCAACAACCGGGGAAACCTGGGGGATGTCGTCAAGGACGTGACCTCCAGCGATGCGCTGAGGGGCTATGTAGTCGCT GGCACGACTGCGGGGCTGACTGCCGGCGTCTACGACAAATGGACCTCGACCCAGACCGGCACCTCGACCGCTCTACCGAACACCGGGGCCGTGGCGCCCG CCGCAGGGTTGGGCACCTGGCAAGGTGTGGGCCAGTTCACCTCGAACCAGTTGCTGCAGAATGGCACTTCGGTGCTGTTGGACCGGGCGCTGGGCGGCAA GGGCAGCCTGGGCGATGCGTTGCAAAACAGCCTGGCAAATGCCTTTGCGGCCTACGGCTTCAAGCTGATTGGCGACACCACCCATGGCGTGCTGGACGAC GGCAGCCTCGGCAAGATCGGCTTGCACGCCTTGATGGGAGGTCTGGCCGCCGAAGCGGTCGGTGGCGATTTCCGTACCGGAGCCCTGGCTGCGGGAGTCA ACGAGGCGCTGGTGGATAGCCTCGCCAAGCAATACGCCAGCCTGCCCATCGATGACAAGAAGGGCCTGCTGATCATGAGTTCGCAGTTGATCGGCGTGCT GGCGGCTTCGACGCAGGGCGATGCGGACGCCAAGAGCTTGCAGACGGGAGCCTGGGTGGCGGGGAATGCCACCCAACACAACTACCTCAGTCATTGGCAG GAGGAGAAGAAGCGGCAGGAGGTCGATGGCTGCAAGGACAAACAGCTCTGCAAAACCGGAATAGAAGCCAAATGGGCAATTATTTCGGCCCAGCAGGATG TCGGTATCGTTGTAGGTGTTGGAGGAGGCATCGGTCTTTCGACAGCTGAAACCGCAGTGGGTGTTTATGAGCTGGTCAAGAACTGGAGGGAAACCTATGC AGCTCTGGAGCAGTTGGCCACTTCGCCAGAGTTCCGGCAGCAGTTTGGCGATAACTACCTGAAGGGGCTGGAGGAGCGCGCCGCATTCTTGACCCAGGCT TACGAGGATGCCGGCTGGCAAGGTTCGGTCACAGCTGGTGTCGAGGGCGGTAGGTTCGCTGCGGAACTTGTTGGCGTTCTGACGGCAGTGAAAGGTGGCG CGCAGATAACCGCCAAGCTGCCAACAGCAGCCAAGAACCTGGTCAACGCGATTGCGGAGTCACCTGTTTCCGGTAGTATGAGTTCGCAGCTCGGGGCAGT GGGGGATTTGGGTCGGCTGGGTGGGGGTCCAAAAGCAACTGGGACTGCTGCTGAAGCGGCTATTCAAGTTCCTGGGCGTGTTCAGTCACGCGTTAACTTG ATGACTGGTGACAAAAGTGCGGGTTGGGAGCACGTTGTAAGTCGTCACTTCAATCCAGAGGTAAATGCAAGCCAATTCACTATAGGGCAGGCTGAGCTTC GCACTTTGCTTCAAAGTAAAGAGGTGGTGAGTGCGCCTGTAACGCGAATGTTAGAAAGTGCGCAAGGTATTCGATATGTTCGAGAAGTGAATCTCAGTGG GCCTATTGGTATTGATAAGTTCAGTGGTCAGCCTACCTCTACCATGACTGTTCTTACTGATAGGTTTGGTAACTTAATAACGACTACTCCGGGGGTTGTT AAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
AATTAATTGGAAGCCTTGCGGAGCAATCTTGTCGTGAAGAGCTATCTAAGTCATGGGGCGGGCTTAGAGAATCGGGAAATCAGTTGTTCTCTATCTTGGC GGACAGGCTCGGCTTGATTGGTAGCGCATTTGTGTTGAGTTGGACGCCTGAGCAAGCTGAGGATTTATATACGATCCTAGTTAATGGGAGTGAAGTGGTT TGGCTTGAGGTTTCAAGGTCTAATGGGGAGGTAGTGGACTTTCAAACTACTAGTGTGAAGGAGTACGAGAGGTCGCTTCGTTCACGACAGAGTAGGATCA AATTGGCGGTTGCTCTTGATTTGGCACGTCAGCATTGAAAAGCCCCGGCCTTGCCGGGGCTATTTATTTCACTCTGCGGTAATCACCAAGCAGCCCTGCA TGACTCTGATTCTGACTTTCTCGTTGACCTCGAATCCAGCCAGCGAATAAAGGGGGCAGCGAATAAAGAATAAAGGGGACAAAAGAATAAAGGGGACAGA
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Amino Acid Sequence |
>hypothetical protein
DIARDDAGGWANRLENISGNLESTGDMRFSVSSLLNRRETLEIEGDLQNSAIGVRCTGCQLSERWGKTRSSSELVWIREYKSTLGESSAAASITAGRDLL VVGASLQNIASNISAVRDATLSLSNFENKGYALGEYAVRGVYSPPSKFGEELLMRILAYNAVNDPSYGEGYASTGGRLPNIHYFDKNFNEKVSPLEVIHG NGKNGGPGWHLYFGTLDVEYPDTDRWNKAIGRIPAPNYSSKKTDAIPDLLKGLAPLDELTINKGANSTVGAVVQAGGRVTVNAAESFNNSVLQGFQAVQE TQLPHQDIAVSSTTSAVVTLKSQLPADLARQQINPLTLPGFSLPQGQNGLFRLASQGAQVNQASGALKSASDLTQSGHGVSVSAQTGSGASGWSTQARRV GDDRVTSLAGSAYQGRVAEAIDALRASAPISGDGGNTGRFQAGEHQATTGLGGLVEGNASGHSGNGVILADLRGGLPSFSSLPAADRVQGTVPGYDGNGT ILANWQGAQATVQASPLTVRVEGVVSSPGGNGSILADLPAEQSSVQALPSAVRAQGSLPRLEERSALLAEPPVGQPALQTLPSVARVEGVPSNATPSNSH KYLIETNPALTELKQFLNSDYLLGGLGINPDDSKKRLGDGLYEQRLVREAIVQRTGQRFIAGLNSDEAMFRYLMDNAIASKDVLGLTPGVTLSAAQVAAL THDIVWLEEVEVNGEKVLAPVVYLAQAEGRLGPNGALIQGRDVNLITGGDLRNAGTLRAQNDLSATAGNIDNSGLIEAGNRLDLLASGSIRNDQGGIIAG REVSLSALTGDVINEQTVTQHQSSYRGTGTTEAFADSAARIEAAQKLTVSAGRDVANIGGVIDSKGDLALQGGRDVLVSAAVAERGWTAGSQAYQTQTTQ MGAEVVAGRDISVSAGRDISVVGSRIDARRDVTFEAGRDVGLVAAANEEHAYGKTKKVTFQDDKITQQATRVDAGGDLAINAGQDLRLVASQASAGDEAY LVAGDKLELLAANDSSYYLYDKKSKGSFGSKKTRRDEITDVTAVGSQISSGGDLTLLSGGDQTYQGAKLESGNDLAIVSGGAVTFEAVKDLHQESHEKSK GNLAWQSSKGKGQTDETVRQSQLVAQGNLAIKAVEGLKIDLKHIDQKTVSQTIDAMVQADPQLAWLKQMEQRGDVDWRRVQELHDSWKYSNSGLGVGAQL AIAIVVAYFTAGAASAALGSMAGVGAGSGSMMAAAGSTAMVQAGTAVGTAAAGWANAAGTAVAMGMASNGAISTINNRGNLGDVVKDVTSSDALRGYVVA GTTAGLTAGVYDKWTSTQTGTSTALPNTGAVAPAAGLGTWQGVGQFTSNQLLQNGTSVLLDRALGGKGSLGDALQNSLANAFAAYGFKLIGDTTHGVLDD GSLGKIGLHALMGGLAAEAVGGDFRTGALAAGVNEALVDSLAKQYASLPIDDKKGLLIMSSQLIGVLAASTQGDADAKSLQTGAWVAGNATQHNYLSHWQ EEKKRQEVDGCKDKQLCKTGIEAKWAIISAQQDVGIVVGVGGGIGLSTAETAVGVYELVKNWRETYAALEQLATSPEFRQQFGDNYLKGLEERAAFLTQA YEDAGWQGSVTAGVEGGRFAAELVGVLTAVKGGAQITAKLPTAAKNLVNAIAESPVSGSMSSQLGAVGDLGRLGGGPKATGTAAEAAIQVPGRVQSRVNL MTGDKSAGWEHVVSRHFNPEVNASQFTIGQAELRTLLQSKEVVSAPVTRMLESAQGIRYVREVNLSGPIGIDKFSGQPTSTMTVLTDRFGNLITTTPGVV K
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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